RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
VPS25-205ENST00000590339 SHHQ15465 462 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 MEA1Q16626 185 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 DUSP28Q4G0W2 176 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 CCDC40Q4G0X9 1142 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 FKBP15Q5T1M5 1219 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 ABHD15Q6UXT9 468 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 SEPT14Q6ZU15 432 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 STXBP4Q6ZWJ1 553 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 ZNF720Q7Z2F6 126 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 MYCT1Q8N699 235 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 OR6J1Q8NGC5 347 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 PPP1R13LQ8WUF5 828 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 TMEM174Q8WUU8 243 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 ATP6V0A1Q93050 837 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 EEF2KMTQ96G04 330 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 C16orf45Q96MC5 204 aaPredicted RBP10.33□□□□□ -0.76
VPS25-205ENST00000590339 SLC9A2Q9UBY0 812 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 PPP2R2CQ9Y2T4 447 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 SAMM50Q9Y512 469 aa10.33□□□□□ -0.76
VPS25-205ENST00000590339 CEP290O15078 2479 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 MCM3APO60318 1980 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 IGKV6D-21A0A0A0MT36 114 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 A0A0U1RQG5 324 aaPredicted RBP10.32□□□□□ -0.76
VPS25-205ENST00000590339 GOLGA6L9A6NEM1 432 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 USO1O60763 962 aaKnown RBP10.32□□□□□ -0.76
VPS25-205ENST00000590339 NR3C1P04150 777 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 PSAPP07602 524 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 SUPT20HL2P0C7V6 817 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 PLS3P13797 630 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 TNNT1P13805 278 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 NR2F2P24468 414 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 KRT9P35527 623 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 KLK7P49862 253 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 CDK7P50613 346 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 NCKAP1LP55160 1127 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 ACTR2P61160 394 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 PPP2R3AQ06190 1150 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 KCNA1Q09470 495 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 ITGA7Q13683 1181 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 C9orf50Q5SZB4 431 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 TOGARAM2Q6ZUX3 1019 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 ANO5Q75V66 913 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 ANKRD33Q7Z3H0 272 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 FRMD5Q7Z6J6 570 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 TMTC1Q8IUR5 882 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 CCDC60Q8IWA6 550 aaPredicted RBP10.32□□□□□ -0.76
VPS25-205ENST00000590339 FAM178BQ8IXR5 827 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 TOX2Q96NM4 488 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 MKNK1Q9BUB5 465 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 DMAC2Q9NW81 257 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 TRMT1Q9NXH9 659 aaKnown RBP10.32□□□□□ -0.76
VPS25-205ENST00000590339 Q9Y3F1 56 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 R3HCC1Q9Y3T6 440 aaKnown RBP10.32□□□□□ -0.76
VPS25-205ENST00000590339 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
VPS25-205ENST00000590339 RBM47A0AV96 593 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 TMEM150BA6NC51 233 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 SFI1A8K8P3 1242 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 PES1O00541 588 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 KIAA0355O15063 1070 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 TLR3O15455 904 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 ZSCAN12O43309 604 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 SORBS3O60504 671 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 ARIH2O95376 493 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 TUBB4AP04350 444 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 UBA1P22314 1058 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 RPL13P26373 211 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 HNRNPH3P31942 346 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 EPHB4P54760 987 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 NKX3-2P78367 333 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 ZBED6P86452 979 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 CDK17Q00537 523 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 SP2Q02086 613 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 PRKCEQ02156 737 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 KCNMA1Q12791 1236 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 ADAM9Q13443 819 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 MYBPC2Q14324 1141 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 MTF1Q14872 753 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 PTPN14Q15678 1187 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 LY6KQ17RY6 165 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 LRIT3Q3SXY7 679 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 DNTTIP2Q5QJE6 756 aaKnown RBP10.31□□□□□ -0.76
VPS25-205ENST00000590339 ODR4Q5SWX8 454 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 PLA2G4FQ68DD2 849 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 CYP26C1Q6V0L0 522 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 Q7L0L9 218 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 CREBRFQ8IUR6 639 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 SLC9A9Q8IVB4 645 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 C12orf56Q8IXR9 622 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 SLC17A8Q8NDX2 589 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 OR8K1Q8NGG5 319 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 SCFD2Q8WU76 684 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 CPLX3Q8WVH0 158 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 KCNN1Q92952 543 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 HVCN1Q96D96 273 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 BORCS6Q96GS4 357 aa10.31□□□□□ -0.76
VPS25-205ENST00000590339 DRC1Q96MC2 740 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms