RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 ERLIN2O94905 339 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 PLS3P13797 630 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 FGFR4P22455 802 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 NPTX2P47972 431 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 EFNA5P52803 228 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 PCBP1Q15365 356 aaKnown RBP eCLIP17.14■□□□□ 0.33
GHDC-209ENST00000588762 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 MYCT1Q8N699 235 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 TMEM87AQ8NBN3 555 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 STAMQ92783 540 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 MINDY3Q9H8M7 445 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 PARVGQ9HBI0 331 aa17.14■□□□□ 0.33
GHDC-209ENST00000588762 DENND3A2RUS2 1198 aa17.13■□□□□ 0.33
GHDC-209ENST00000588762 ACTN4O43707 911 aaKnown RBP17.13■□□□□ 0.33
GHDC-209ENST00000588762 ZSCAN20P17040 1043 aaPredicted RBP17.13■□□□□ 0.33
GHDC-209ENST00000588762 LONRF3Q496Y0 759 aa17.13■□□□□ 0.33
GHDC-209ENST00000588762 CDCA2Q69YH5 1023 aaPredicted RBP17.13■□□□□ 0.33
GHDC-209ENST00000588762 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
GHDC-209ENST00000588762 CCDC34Q96HJ3 373 aa17.13■□□□□ 0.33
GHDC-209ENST00000588762 PHLPP2Q6ZVD8 1323 aa17.13■□□□□ 0.33
GHDC-209ENST00000588762 PTPRSQ13332 1948 aa17.13■□□□□ 0.33
GHDC-209ENST00000588762 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.12■□□□□ 0.33
GHDC-209ENST00000588762 H0YCG3 227 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 K7ERI5 159 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 ZNF202O95125 648 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 AMHP03971 560 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 IDEP14735 1019 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 GAP43P17677 238 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 AFMP43652 599 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 ZNF131P52739 623 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 WDR5P61964 334 aaKnown RBP17.12■□□□□ 0.33
GHDC-209ENST00000588762 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 MAPK6Q16659 721 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 CCDC65Q8IXS2 484 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 CNNM3Q8NE01 707 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 DNAJC19Q96DA6 116 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 ADAM2Q99965 735 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 NTPCRQ9BSD7 190 aaKnown RBP17.12■□□□□ 0.33
GHDC-209ENST00000588762 TRIM9Q9C026 710 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 CHST12Q9NRB3 414 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 PRMT7Q9NVM4 692 aaPredicted RBP17.12■□□□□ 0.33
GHDC-209ENST00000588762 CXXC1Q9P0U4 656 aaPredicted RBP17.12■□□□□ 0.33
GHDC-209ENST00000588762 SEL1LQ9UBV2 794 aa17.12■□□□□ 0.33
GHDC-209ENST00000588762 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
GHDC-209ENST00000588762 TTC3P53804 2025 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 ENPP3O14638 875 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 SLC16A4O15374 487 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 GADD45BO75293 160 aaPredicted RBP17.11■□□□□ 0.33
GHDC-209ENST00000588762 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
GHDC-209ENST00000588762 LIG1P18858 919 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 SCP2P22307 547 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 AXLP30530 894 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 UBE2HP62256 183 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 ASIC1P78348 528 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 TMEM132AQ24JP5 1023 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 KANK3Q6NY19 840 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 C7orf25Q9BPX7 421 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 KIFC3Q9BVG8 833 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
GHDC-209ENST00000588762 C1orf112Q9NSG2 853 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 AGPAT5Q9NUQ2 364 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 PANK4Q9NVE7 773 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
GHDC-209ENST00000588762 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 GBF1Q92538 1859 aa17.11■□□□□ 0.33
GHDC-209ENST00000588762 GOLGA6L22H0YM25 854 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 TRAK2O60296 914 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 TSPAN1O60635 241 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 PRKCBP05771 671 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 ATP2A2P16615 1042 aaKnown RBP17.1■□□□□ 0.33
GHDC-209ENST00000588762 ABCD1P33897 745 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 STRN3Q13033 797 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 DSC3Q14574 896 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 FAM187BQ17R55 369 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 HERC4Q5GLZ8 1057 aaPredicted RBP17.1■□□□□ 0.33
GHDC-209ENST00000588762 CNNM4Q6P4Q7 775 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.1■□□□□ 0.33
GHDC-209ENST00000588762 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 RTN4RL1Q86UN2 441 aaPredicted RBP17.1■□□□□ 0.33
GHDC-209ENST00000588762 FAM178BQ8IXR5 827 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 FMR1NBQ8N0W7 255 aaPredicted RBP17.1■□□□□ 0.33
GHDC-209ENST00000588762 SLC17A8Q8NDX2 589 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 PHOSPHO2Q8TCD6 241 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 PAGE5Q96GU1 130 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 FZD8Q9H461 694 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 TMEM134Q9H6X4 195 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
GHDC-209ENST00000588762 ARHGAP28Q9P2N2 729 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms