RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 REEP2Q9BRK0 252 aa23.71■■□□□ 1.39
RETREG3-204ENST00000586796 RGS18Q9NS28 235 aa23.71■■□□□ 1.39
RETREG3-204ENST00000586796 A0A1B0GVL5 298 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 TLL1O43897 1013 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 DMP1Q13316 513 aaPredicted RBP23.7■■□□□ 1.38
RETREG3-204ENST00000586796 GIT2Q14161 759 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 DSC3Q14574 896 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 IFNLR1Q8IU57 520 aaPredicted RBP23.7■■□□□ 1.38
RETREG3-204ENST00000586796 IQUBQ8NA54 791 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 TOP1MTQ969P6 601 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 C2orf40Q9H1Z8 148 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 C1orf112Q9NSG2 853 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 MSRAQ9UJ68 235 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 KCNH3Q9ULD8 1083 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 MICAL3Q7RTP6 2002 aa23.7■■□□□ 1.38
RETREG3-204ENST00000586796 FAM13AO94988 1023 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 GJB5O95377 273 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 CMA1P23946 247 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 NPTX2P47972 431 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 E2F4Q16254 413 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 CDCA2Q69YH5 1023 aaPredicted RBP23.69■■□□□ 1.38
RETREG3-204ENST00000586796 TWF2Q6IBS0 349 aaKnown RBP23.69■■□□□ 1.38
RETREG3-204ENST00000586796 SLC24A5Q71RS6 500 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 CPB2Q96IY4 423 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 NFKBIZQ9BYH8 718 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 KMT5AQ9NQR1 393 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 LRFN2Q9ULH4 789 aa23.69■■□□□ 1.38
RETREG3-204ENST00000586796 YBX2Q9Y2T7 364 aaKnown RBP23.69■■□□□ 1.38
RETREG3-204ENST00000586796 ADGRA3Q8IWK6 1321 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 TRIOBPQ9H2D6 2365 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.68■■□□□ 1.38
RETREG3-204ENST00000586796 MYMKA6NI61 221 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 SLC16A4O15374 487 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 TSPAN1O60635 241 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 TBCAO75347 108 aaKnown RBP23.68■■□□□ 1.38
RETREG3-204ENST00000586796 PLS3P13797 630 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 PFKFB1P16118 471 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 DNAJB2P25686 324 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 SARSP49591 514 aaKnown RBP23.68■■□□□ 1.38
RETREG3-204ENST00000586796 FXR1P51114 621 aaKnown RBP eCLIP23.68■■□□□ 1.38
RETREG3-204ENST00000586796 NCBP1Q09161 790 aaKnown RBP23.68■■□□□ 1.38
RETREG3-204ENST00000586796 RAB30Q15771 203 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 MYCT1Q8N699 235 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 NKX2-4Q9H2Z4 354 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 CHST12Q9NRB3 414 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 AGPAT5Q9NUQ2 364 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 ODF2LQ9ULJ1 636 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 PCDHB7Q9Y5E2 793 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 PCDHA11Q9Y5I1 949 aa23.68■■□□□ 1.38
RETREG3-204ENST00000586796 C9IYK1 514 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 B4GALT5O43286 388 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 TMEM132AQ24JP5 1023 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 FSIP1Q8NA03 581 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 RNF169Q8NCN4 708 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 DDX12PQ92771 950 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 TIFAQ96CG3 184 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 YME1L1Q96TA2 773 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 DACT1Q9NYF0 836 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 USP20Q9Y2K6 914 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 TCHHQ07283 1943 aa23.67■■□□□ 1.38
RETREG3-204ENST00000586796 GOLGA6L4A6NEF3 574 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 PRKCBP05771 671 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 STAG3L1P0CL83 205 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 HOXA11P31270 313 aaPredicted RBP23.66■■□□□ 1.38
RETREG3-204ENST00000586796 MAPK6Q16659 721 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 FAM43BQ6ZT52 329 aaPredicted RBP23.66■■□□□ 1.38
RETREG3-204ENST00000586796 NPAS4Q8IUM7 802 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 RAD9AQ99638 391 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 CUEDC2Q9H467 287 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 C17orf75Q9HAS0 396 aa23.66■■□□□ 1.38
RETREG3-204ENST00000586796 PRMT7Q9NVM4 692 aaPredicted RBP23.66■■□□□ 1.38
RETREG3-204ENST00000586796 LARSQ9P2J5 1176 aaKnown RBP23.66■■□□□ 1.38
RETREG3-204ENST00000586796 PTPRSQ13332 1948 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 LCHNA4D1U4 455 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 K7ERI5 159 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 CA3P07451 260 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 ARF4P18085 180 aaPredicted RBP23.65■■□□□ 1.38
RETREG3-204ENST00000586796 EFNA5P52803 228 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 SMTNP53814 917 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 PCBP1Q15365 356 aaKnown RBP eCLIP23.65■■□□□ 1.38
RETREG3-204ENST00000586796 AMHR2Q16671 573 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 LONRF3Q496Y0 759 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 CDR2LQ86X02 465 aaPredicted RBP23.65■■□□□ 1.38
RETREG3-204ENST00000586796 CCDC113Q9H0I3 377 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 FZD8Q9H461 694 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 PARVGQ9HBI0 331 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 SERTAD1Q9UHV2 236 aa23.65■■□□□ 1.38
RETREG3-204ENST00000586796 A0A1W2PQ27 194 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 A0A1W2PQ64 194 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 A0A1W2PQD8 194 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 IDEP14735 1019 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 AXLP30530 894 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 GATMP50440 423 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 NDUFA8P51970 172 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 PRPF4BQ13523 1007 aaKnown RBP23.64■■□□□ 1.37
RETREG3-204ENST00000586796 NOTUMQ6P988 496 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 ECHDC2Q86YB7 292 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 CEP57L1Q8IYX8 460 aa23.64■■□□□ 1.37
RETREG3-204ENST00000586796 MRPS27Q92552 414 aaKnown RBP23.64■■□□□ 1.37
RETREG3-204ENST00000586796 PYM1Q9BRP8 204 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms