RNA–Protein interactions for RNA: ENST00000585385.5

CACNA2D4-218, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

TSL 5

Gene CACNA2D4, Length 976 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-218	ENST00000585385	NT5C1B-RDH14	C9J2C7	533 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SRGAP2B	P0DMP2	458 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SKI	P12755	728 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	KRT2	P35908	639 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TEC	P42680	631 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	POLG	P54098	1239 aa	Predicted RBP	13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	BCAR1	P56945	870 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SPIRE1	Q08AE8	756 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	KCNC3	Q14003	757 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ME3	Q16798	604 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ANKRD54	Q6NXT1	300 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	LLGL2	Q6P1M3	1020 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TMEM184A	Q6ZMB5	413 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	C4orf19	Q8IY42	314 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SLC7A3	Q8WY07	619 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	GTF3C6	Q969F1	213 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	DYDC2	Q96IM9	177 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	DHX33	Q9H6R0	707 aa	Known RBP	13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	IFT122	Q9HBG6	1241 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	FAM105A	Q9NUU6	356 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	RGL1	Q9NZL6	768 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	PPME1	Q9Y570	386 aa		13.38	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	MEIS3P2	A8K0S8	358 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	BAG4	O95429	457 aa	Known RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	YWHAB	P31946	246 aa	Known RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	RFC5	P40937	340 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ALDH7A1	P49419	539 aa	Known RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	RAB27A	P51159	221 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	CYP4A11	Q02928	519 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	CTTN	Q14247	550 aa	Known RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SMC1A	Q14683	1233 aa	Known RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	XKR9	Q5GH70	373 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	EXOC8	Q8IYI6	725 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SLFN12	Q8IYM2	578 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	PRPF31	Q8WWY3	499 aa	Known RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	PSPC1	Q8WXF1	523 aa	Known RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SUSD6	Q92537	303 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TNFRSF25	Q93038	417 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TMEM143	Q96AN5	459 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TMEM169	Q96HH4	297 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	RPGRIP1	Q96KN7	1286 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	PHF7	Q9BWX1	381 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	BRMS1	Q9HCU9	246 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	AGPAT5	Q9NUQ2	364 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TBC1D13	Q9NVG8	400 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	INPP5F	Q9Y2H2	1132 aa		13.37	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	MYH11	P35749	1972 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	C2orf71	A6NGG8	1288 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ZBTB39	O15060	712 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ZNF623	O75123	536 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	OFD1	O75665	1012 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SRGAP2C	P0DJJ0	459 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	CA8	P35219	290 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	FOSB	P53539	338 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	LAMTOR4	Q0VGL1	99 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	CBX2	Q14781	532 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	EMC2	Q15006	297 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	NOMO2	Q5JPE7	1267 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SYCE2	Q6PIF2	218 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	GLB1L	Q6UWU2	654 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	OTUD6A	Q7L8S5	288 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SRGAP1	Q7Z6B7	1085 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TMEM173	Q86WV6	379 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	MRPL43	Q8N983	215 aa	Known RBP	13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	NSUN7	Q8NE18	718 aa	Known RBP	13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	RSPH1	Q8WYR4	309 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	APOL5	Q9BWW9	433 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	S1PR5	Q9H228	398 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ZSWIM4	Q9H7M6	989 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	NRDE2	Q9H7Z3	1164 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	MINDY3	Q9H8M7	445 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	PCDHB2	Q9Y5E7	798 aa		13.36	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	GAS2	O43903	313 aa	Known RBP	13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	JAK2	O60674	1132 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	SLITRK3	O94933	977 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	NEK4	P51957	841 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	HFE2	Q6ZVN8	426 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	FERMT3	Q86UX7	667 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TPH2	Q8IWU9	490 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	TCP11	Q8WWU5	503 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	EDA	Q92838	391 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	CASP10	Q92851	521 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	PGBD4	Q96DM1	585 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	IGSF21	Q96ID5	467 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	MTR	Q99707	1265 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ZBP1	Q9H171	429 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	HCFC2	Q9Y5Z7	792 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	DOCK6	Q96HP0	2047 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	PIEZO1	Q92508	2521 aa		13.35	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	BTBD18	B2RXH4	712 aa		13.34	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	WNT7A	O00755	349 aa		13.34	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	ASAP2	O43150	1006 aa		13.34	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	B4GALT3	O60512	393 aa		13.34	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	CLASP2	O75122	1294 aa	Known RBP	13.34	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	CXCL14	O95715	111 aa		13.34	□□□□□ -0.27
CACNA2D4-218	ENST00000585385	GALT	P07902	379 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms