RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
RNF43-207ENST00000583753 FAM84AQ96KN4 292 aa11.37□□□□□ -0.59
RNF43-207ENST00000583753 EIF2AK1Q9BQI3 630 aaKnown RBP11.37□□□□□ -0.59
RNF43-207ENST00000583753 TISP43B9A030 160 aa11.37□□□□□ -0.59
RNF43-207ENST00000583753 SMIM24O75264 130 aa11.37□□□□□ -0.59
RNF43-207ENST00000583753 HNRNPH3P31942 346 aaKnown RBP11.37□□□□□ -0.59
RNF43-207ENST00000583753 ZNF543Q08ER8 600 aa11.37□□□□□ -0.59
RNF43-207ENST00000583753 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
RNF43-207ENST00000583753 HAS1Q92839 578 aa11.37□□□□□ -0.59
RNF43-207ENST00000583753 KLF6Q99612 283 aaPredicted RBP11.37□□□□□ -0.59
RNF43-207ENST00000583753 TCHPQ9BT92 498 aa11.37□□□□□ -0.59
RNF43-207ENST00000583753 PABPC3Q9H361 631 aaKnown RBP11.37□□□□□ -0.59
RNF43-207ENST00000583753 LRRC4CQ9HCJ2 640 aa11.37□□□□□ -0.59
RNF43-207ENST00000583753 PI4K2BG5E9Z4 385 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 BAG2O95816 211 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 FMO5P49326 533 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 KRT17Q04695 432 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 SWT1Q5T5J6 900 aaKnown RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 FRMD5Q7Z6J6 570 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 NT5DC3Q86UY8 548 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 LMNTD2Q8IXW0 634 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 RUBCNQ92622 972 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 FAM129AQ9BZQ8 928 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 EXOC1LA0A1B0GW35 172 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 CREB1P16220 341 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 TNNI1P19237 187 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 RPL21P46778 160 aaKnown RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 MXI1P50539 228 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 RAD23BP54727 409 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 ELF3P78545 371 aaPredicted RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 DNAJC3Q13217 504 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 SMAD1Q15797 465 aaKnown RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 PRUNE1Q86TP1 453 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 LONP2Q86WA8 852 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 ZNF564Q8TBZ8 553 aaPredicted RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 ACTRT1Q8TDG2 376 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 LRRC8CQ8TDW0 803 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 TATDN2Q93075 761 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 MTMR9Q96QG7 549 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 IQCGQ9H095 443 aaKnown RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.36□□□□□ -0.59
RNF43-207ENST00000583753 USP15Q9Y4E8 981 aaPredicted RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 C5P01031 1676 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 BAZ2AQ9UIF9 1905 aaKnown RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 MYH15Q9Y2K3 1946 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 POLE2P56282 527 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 GPC5P78333 572 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 GIT2Q14161 759 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 DAB2IPQ5VWQ8 1189 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 CAPRIN2Q6IMN6 1127 aaKnown RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 C16orf86Q6ZW13 317 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 SPATA21Q7Z572 469 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 PALB2Q86YC2 1186 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 DTX3LQ8TDB6 740 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 KAT5Q92993 513 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 AGPAT1Q99943 283 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 ZNF577Q9BSK1 485 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 SAYSD1Q9NPB0 183 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 AIPL1Q9NZN9 384 aa11.36□□□□□ -0.59
RNF43-207ENST00000583753 SUCLA2Q9P2R7 463 aaPredicted RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 AJAP1Q9UKB5 411 aaPredicted RBP11.36□□□□□ -0.59
RNF43-207ENST00000583753 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.36□□□□□ -0.59
RNF43-207ENST00000583753 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 A0A0G2JND7 137 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 SLMAPQ14BN4 828 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 PPP4R3CPQ6ZMV5 832 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 MIER3Q7Z3K6 550 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 IRF2BP2Q7Z5L9 587 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
RNF43-207ENST00000583753 STMN2Q93045 179 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 ERP27Q96DN0 273 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 RUNDC3BQ96NL0 473 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
RNF43-207ENST00000583753 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.35□□□□□ -0.591e-12■■□□□ 13.6
RNF43-207ENST00000583753 CCDC160A6NGH7 325 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 DRD4P21917 467 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 TARSP26639 723 aaKnown RBP11.35□□□□□ -0.59
RNF43-207ENST00000583753 RWDD2BP57060 319 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 MAPK7Q13164 816 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 ZNF662Q6ZS27 426 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 CPNE8Q86YQ8 564 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 PPP1R14CQ8TAE6 165 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 AGAP11Q8TF27 550 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
RNF43-207ENST00000583753 GANQ9H2C0 597 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 KIF9Q9HAQ2 790 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 TMOD2Q9NZR1 351 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
RNF43-207ENST00000583753 CRYBG1Q9Y4K1 1723 aa11.35□□□□□ -0.59
RNF43-207ENST00000583753 ALDH5A1P51649 535 aaPredicted RBP11.34□□□□□ -0.59
RNF43-207ENST00000583753 PEX3P56589 373 aa11.34□□□□□ -0.59
RNF43-207ENST00000583753 IL9RQ01113 521 aa11.34□□□□□ -0.59
RNF43-207ENST00000583753 BIRC2Q13490 618 aa11.34□□□□□ -0.59
RNF43-207ENST00000583753 GRAPQ13588 217 aa11.34□□□□□ -0.59
RNF43-207ENST00000583753 RCN2Q14257 317 aa11.34□□□□□ -0.59
RNF43-207ENST00000583753 PPP2R5EQ16537 467 aa11.34□□□□□ -0.59
RNF43-207ENST00000583753 CLEC4GQ6UXB4 293 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms