RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 FIZ1Q96SL8 496 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 NOC4LQ9BVI4 516 aaKnown RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 INO80BQ9C086 356 aaPredicted RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 ADAMTS10Q9H324 1103 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 IFT122Q9HBG6 1241 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 PANK4Q9NVE7 773 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 ATP11BQ9Y2G3 1177 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 TRPV2Q9Y5S1 764 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 RSPH10B2B2RC85 870 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 EIF3DO15371 548 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC47-203ENST00000580986 KLRC4O43908 158 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 TRAK2O60296 914 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 PPP1R37O75864 691 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 VTNP04004 478 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
CCDC47-203ENST00000580986 RSPH10BP0C881 870 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 SELPP16109 830 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 EIF4BP23588 611 aaKnown RBP11.48□□□□□ -0.57
CCDC47-203ENST00000580986 RFC2P35250 354 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 THPOP40225 353 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 PHKA2P46019 1235 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 NPTX2P47972 431 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 RGS19P49795 217 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 NLRP11P59045 1033 aaKnown RBP11.48□□□□□ -0.57
CCDC47-203ENST00000580986 COASYQ13057 564 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 FAM187BQ17R55 369 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 ODR4Q5SWX8 454 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 CCDC183Q5T5S1 534 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 TRAF7Q6Q0C0 670 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 STXBP4Q6ZWJ1 553 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 DYMQ7RTS9 669 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 RHPN2Q8IUC4 686 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 RNF149Q8NC42 400 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 ASAP3Q8TDY4 903 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 PPP1R13LQ8WUF5 828 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 STAMQ92783 540 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 SMARCE1Q969G3 411 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 PRIMPOLQ96LW4 560 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
CCDC47-203ENST00000580986 FAM49AQ9H0Q0 323 aaPredicted RBP11.48□□□□□ -0.57
CCDC47-203ENST00000580986 HIPK3Q9H422 1215 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 TMEM39AQ9NV64 488 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 KIAA1468Q9P260 1216 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 UBE4BO95155 1302 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 LTBP2Q14767 1821 aa11.48□□□□□ -0.57
CCDC47-203ENST00000580986 NPHP3-ACAD11A0A0J9YXS1 232 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 TIMP1P01033 207 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 CHRNA1P02708 482 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 IDEP14735 1019 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 DARSP14868 501 aaKnown RBP11.47□□□□□ -0.57
CCDC47-203ENST00000580986 PPP1R2P41236 205 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 PEX3P56589 373 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 GTF2BQ00403 316 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 RAD51AP2Q09MP3 1159 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 PNOCQ13519 176 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 HERC4Q5GLZ8 1057 aaPredicted RBP11.47□□□□□ -0.57
CCDC47-203ENST00000580986 FAM26FQ5R3K3 315 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 ZNF618Q5T7W0 954 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 LRRC8DQ7L1W4 858 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 ZNF720Q7Z2F6 126 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 SFR1Q86XK3 245 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 ZBTB8OSQ8IWT0 167 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 GRAMD1CQ8IYS0 662 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 MYCT1Q8N699 235 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 BSNDQ8WZ55 320 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 ZBTB10Q96DT7 871 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 GCOM2Q9BZD3 368 aaPredicted RBP11.47□□□□□ -0.57
CCDC47-203ENST00000580986 BLZF1Q9H2G9 400 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 EXOC1Q9NV70 894 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 PCDHA5Q9Y5H7 936 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 CDY2AQ9Y6F7 541 aa11.47□□□□□ -0.57
CCDC47-203ENST00000580986 ADGRA3Q8IWK6 1321 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 A0A087WZ62 844 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 LRRIQ4A6NIV6 560 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 LETM1O95202 739 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-203ENST00000580986 CXCL10P02778 98 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 PFKMP08237 780 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 IQCF3P0C7M6 154 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC47-203ENST00000580986 AXLP30530 894 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 BMT2Q1RMZ1 405 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 KIZQ2M2Z5 673 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 KMT5BQ4FZB7 885 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 FBXO47Q5MNV8 452 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 FOXR2Q6PJQ5 311 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 TSHZ1Q6ZSZ6 1077 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 MAEAQ7L5Y9 396 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 EPM2AIP1Q7L775 607 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-203ENST00000580986 DEPTORQ8TB45 409 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 NLRP7Q8WX94 980 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 NLRP4Q96MN2 994 aa11.46□□□□□ -0.57
CCDC47-203ENST00000580986 FDXACB1Q9BRP7 624 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 556.7 ms