RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZFPM1Q8IX07 1006 aa5.87□□□□□ -1.47
VAPA-203ENST00000577539 GPATCH11Q8N954 259 aa5.87□□□□□ -1.47
VAPA-203ENST00000577539 EXOC4Q96A65 974 aa5.87□□□□□ -1.47
VAPA-203ENST00000577539 NOX5Q96PH1 765 aa5.87□□□□□ -1.47
VAPA-203ENST00000577539 FAM204AQ9H8W3 233 aa5.87□□□□□ -1.47
VAPA-203ENST00000577539 CWC15Q9P013 229 aaKnown RBP5.87□□□□□ -1.47
VAPA-203ENST00000577539 JRKLQ9Y4A0 524 aa5.87□□□□□ -1.47
VAPA-203ENST00000577539 GAKO14976 1311 aa5.87□□□□□ -1.47
VAPA-203ENST00000577539 A0A1B0GUL6 1792 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 SPDYE3A6NKU9 549 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 NFKBIEO00221 500 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 CETN3O15182 167 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 FTCDO95954 541 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 EEF2P13639 858 aaKnown RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 POU3F3P20264 500 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 EIF4BP23588 611 aaKnown RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 SHMT1P34896 483 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 CTSOP43234 321 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 KLHL30Q0D2K2 578 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 SEPT2Q15019 361 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 CDC37Q16543 378 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 CERKLQ49MI3 558 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 COL13A1Q5TAT6 717 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 MSL1Q68DK7 614 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 PDE12Q6L8Q7 609 aaKnown RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 C15orf52Q6ZUT6 534 aaKnown RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 SPICE1Q8N0Z3 855 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 TBC1D5Q92609 795 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 HAS1Q92839 578 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 PLD4Q96BZ4 506 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 RPGRIP1Q96KN7 1286 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 FGFBP2Q9BYJ0 223 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 ANO3Q9BYT9 981 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 NT5C3AQ9H0P0 336 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 RABEP2Q9H5N1 569 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 SWAP70Q9UH65 585 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 SNX12Q9UMY4 172 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 SIK3Q9Y2K2 1263 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 HYOU1Q9Y4L1 999 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 PCDHAC2Q9Y5I4 1007 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 ANO9A1A5B4 782 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 NR2F2P24468 414 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 HOXA13P31271 388 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 ORC2Q13416 577 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 CRY2Q49AN0 593 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 FAM83BQ5T0W9 1011 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 KIAA0319Q5VV43 1072 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 PDXDC1Q6P996 788 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 TSHZ1Q6ZSZ6 1077 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 FAM133AQ8N9E0 248 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 RNF217Q8TC41 542 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 FAM71BQ8TC56 605 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 IFT81Q8WYA0 676 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 LRRC1Q9BTT6 524 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 SH2D4AQ9H788 454 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 ZDHHC3Q9NYG2 299 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 RSPH14Q9UHP6 348 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 INPP5FQ9Y2H2 1132 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 A0A1W2PQJ5 194 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 CHMP2AO43633 222 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 GCFC2P16383 781 aaKnown RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 ICA1Q05084 483 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 KIAA0753Q2KHM9 967 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 FIGNQ5HY92 759 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 C8orf74Q6P047 294 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 TRMT1LQ7Z2T5 733 aaKnown RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 SP8Q8IXZ3 490 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 FAM169BQ8N8A8 192 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 ERMNQ8TAM6 284 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 HDAC7Q8WUI4 952 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 GPRASP2Q96D09 838 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 MS4A14Q96JA4 679 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 CRAMP1Q96RY5 1269 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 OSBPL9Q96SU4 736 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 SELENOOQ9BVL4 669 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 UBXN6Q9BZV1 441 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 PNMA2Q9UL42 364 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 PACSIN2Q9UNF0 486 aaPredicted RBP5.86□□□□□ -1.47
VAPA-203ENST00000577539 KDM3AQ9Y4C1 1321 aa5.86□□□□□ -1.47
VAPA-203ENST00000577539 AHDC1Q5TGY3 1603 aaPredicted RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 FAM221BA6H8Z2 402 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 GOLGA6BA6NDN3 693 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 TBCAO75347 108 aaKnown RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 PRPF6O94906 941 aaKnown RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 MYBL2P10244 700 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 TCP1P17987 556 aaKnown RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 KCNC4Q03721 635 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 GABPAQ06546 454 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 ASIC2Q16515 512 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 PPP4R3AQ6IN85 833 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 WDR93Q6P2C0 686 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 SLC30A10Q6XR72 485 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 SPATA4Q8NEY3 305 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 AFAP1L1Q8TED9 768 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 TAF4BQ92750 862 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 IQCDQ96DY2 449 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 DDX56Q9NY93 547 aaKnown RBP5.85□□□□□ -1.47
VAPA-203ENST00000577539 ZFATQ9P243 1243 aa5.85□□□□□ -1.47
VAPA-203ENST00000577539 DNM3Q9UQ16 869 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms