RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 SPRED2Q7Z698 418 aa13.18□□□□□ -0.3
TRIM25-205ENST00000572021 SYAP1Q96A49 352 aaPredicted RBP13.18□□□□□ -0.3
TRIM25-205ENST00000572021 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
TRIM25-205ENST00000572021 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
TRIM25-205ENST00000572021 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
TRIM25-205ENST00000572021 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
TRIM25-205ENST00000572021 CHD7Q9P2D1 2997 aa13.18□□□□□ -0.3
TRIM25-205ENST00000572021 SLC26A4O43511 780 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM25-205ENST00000572021 GATMP50440 423 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 MAPK7Q13164 816 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 DSC3Q14574 896 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 PHOSPHO2Q8TCD6 241 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
TRIM25-205ENST00000572021 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 PIN4Q9Y237 131 aaKnown RBP13.17□□□□□ -0.3
TRIM25-205ENST00000572021 USP20Q9Y2K6 914 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 TTC3P53804 2025 aa13.17□□□□□ -0.3
TRIM25-205ENST00000572021 ADGRA3Q8IWK6 1321 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 CCDC169A6NNP5 214 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 B4GALT5O43286 388 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 GJB5O95377 273 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 CA3P07451 260 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 STAT6P42226 847 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 PEX3P56589 373 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 UBE2HP62256 183 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 ODR4Q5SWX8 454 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 STAMQ92783 540 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 KIFAP3Q92845 792 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 CPB2Q96IY4 423 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 RGS18Q9NS28 235 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 TMEM63CQ9P1W3 806 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 PCDHA11Q9Y5I1 949 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 CDH23Q9H251 3354 aa13.16□□□□□ -0.3
TRIM25-205ENST00000572021 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 C9IYK1 514 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 TSPAN1O60635 241 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 GUCY2CP25092 1073 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 TWF2Q6IBS0 349 aaKnown RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 DHX58Q96C10 678 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 IFT74Q96LB3 600 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 TTYH1Q9H313 450 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 CERS4Q9HA82 394 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 SLC16A4O15374 487 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 ERLIN2O94905 339 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 EDN1P05305 212 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 HOXA11P31270 313 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 NAMPTP43490 491 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 NPTX2P47972 431 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 SARSP49591 514 aaKnown RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 RAB30Q15771 203 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 AMHR2Q16671 573 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 CDCA2Q69YH5 1023 aaPredicted RBP13.15□□□□□ -0.3
TRIM25-205ENST00000572021 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 ZBTB8OSQ8IWT0 167 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 CRIPAKQ8N1N5 446 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 YME1L1Q96TA2 773 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 RAD9AQ99638 391 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 ZHX3Q9H4I2 956 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 STK17AQ9UEE5 414 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
TRIM25-205ENST00000572021 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 A0A1B0GVL5 298 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 MYMKA6NI61 221 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 POLR2DO15514 142 aaKnown RBP13.14□□□□□ -0.31
TRIM25-205ENST00000572021 FGFR1P11362 822 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 POU5F1BQ06416 359 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 GIT2Q14161 759 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 E2F4Q16254 413 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 PPP2R2DQ66LE6 453 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 SV2BQ7L1I2 683 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
TRIM25-205ENST00000572021 DEFB123Q8N688 67 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 LPPQ93052 612 aa13.14□□□□□ -0.31
TRIM25-205ENST00000572021 SCAND2PQ9GZW5 306 aaPredicted RBP13.14□□□□□ -0.31
TRIM25-205ENST00000572021 KMT5AQ9NQR1 393 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms