RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 DSEQ9UL01 958 aa7.55□□□□□ -1.2
HERPUD1-208ENST00000563911 BCORQ6W2J9 1755 aa7.55□□□□□ -1.2
HERPUD1-208ENST00000563911 TCRBV5S4A2TA0A5A2 114 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 ZNF561-AS1K7EIQ3 104 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 NEMP1O14524 444 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 KCNK3O14649 394 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 TCERG1O14776 1098 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 RAB11FIP3O75154 756 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 KRT37O76014 449 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 AMY2AP04746 511 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 HSPA5P11021 654 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 AMY2BP19961 511 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 GP2P55259 537 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 DSG1Q02413 1049 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 STAT4Q14765 748 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 CRY2Q49AN0 593 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 HABP4Q5JVS0 413 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 DCP2Q8IU60 420 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 TTC5Q8N0Z6 440 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 PSMD1Q99460 953 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 AP5M1Q9H0R1 490 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 RXFP1Q9HBX9 757 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 PGAP2Q9UHJ9 254 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 DBR1Q9UK59 544 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 NIP7Q9Y221 180 aaKnown RBP eCLIP7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 SIT1Q9Y3P8 196 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 CEMIPQ8WUJ3 1361 aa7.54□□□□□ -1.2
HERPUD1-208ENST00000563911 SLC12A8A0AV02 714 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 ALG1L2C9J202 215 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 HGSO14964 777 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 ZEB2O60315 1214 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 MAFKO60675 156 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 FKBP9O95302 570 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 CELF2O95319 508 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 ATP2A2P16615 1042 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 BPIP17213 487 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 SDHBP21912 280 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 ECE1P42892 770 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 ID4P47928 161 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 CXCL9Q07325 125 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 CLEC4GQ6UXB4 293 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 LHFPL2Q6ZUX7 228 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 USP50Q70EL3 339 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 FKBP9P1Q75LS8 142 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 FERMT3Q86UX7 667 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 NETO2Q8NC67 525 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 CHTF18Q8WVB6 975 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 KIRREL1Q96J84 757 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 FMNL2Q96PY5 1086 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 TEX13AQ9BXU3 409 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 NUDT5Q9UKK9 219 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 NUB1Q9Y5A7 615 aa7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 COL3A1P02461 1466 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-208ENST00000563911 ZC3H12DA2A288 527 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 F8W031 263 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 SLC27A2O14975 620 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 CYBBP04839 570 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 DBHP09172 617 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 ADCYAP1R1P41586 468 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 SLC6A11P48066 632 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 GMPSP49915 693 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 GUCY2FP51841 1108 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 KPNA1P52294 538 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 OCRLQ01968 901 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 FYB2Q5VWT5 728 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 RNF219Q5W0B1 726 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 PAQR3Q6TCH7 311 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 C11orf74Q86VG3 221 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 RBM12BQ8IXT5 1001 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 NLGN4XQ8N0W4 816 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 UHMK1Q8TAS1 419 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 STAG1Q8WVM7 1258 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 SEC14L1Q92503 715 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 BOCQ9BWV1 1114 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 CD244Q9BZW8 370 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 SMOC1Q9H4F8 434 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 TNFRSF12AQ9NP84 129 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 GPRC5DQ9NZD1 345 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 YBX2Q9Y2T7 364 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.21
HERPUD1-208ENST00000563911 TRPM7Q96QT4 1865 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 YDJCA8MPS7 323 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 NUDT19A8MXV4 375 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 H7C1D1 291 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 MAN2B1O00754 1011 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 NPHP1O15259 732 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 GPR39O43194 453 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 MPOP05164 745 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 PDGFRBP09619 1106 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 PMLP29590 882 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 ALDH1B1P30837 517 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 TMPRSS15P98073 1019 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 IRF9Q00978 393 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 TEFQ10587 303 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 DCTN1Q14203 1278 aa7.51□□□□□ -1.21
HERPUD1-208ENST00000563911 EMC4Q5J8M3 183 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms