RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 NAB2Q15742 525 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 SLC15A2Q16348 729 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 PTPROQ16827 1216 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 TSNAXIP1Q2TAA8 658 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 ARL6IP4Q66PJ3 421 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 FAM114A1Q8IWE2 563 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 REXO1Q8N1G1 1221 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 STK32AQ8WU08 396 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 PPP1R12CQ9BZL4 782 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 TRIM31Q9BZY9 425 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 AZI2Q9H6S1 392 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 RIOX1Q9H6W3 641 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 JMJD4Q9H9V9 463 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 ETNK1Q9HBU6 452 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 DISC1Q9NRI5 854 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 PEX11AO75192 247 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 ACADSP16219 412 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 GNA11P29992 359 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 TXKP42681 527 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 DAGLBQ8NCG7 672 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 UTP4Q969X6 686 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 IFT43Q96FT9 208 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 TRAPPC9Q96Q05 1148 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 DDX23Q9BUQ8 820 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 CCDC134Q9H6E4 229 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 ZWILCHQ9H900 591 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 SIK3Q9Y2K2 1263 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 IGKV6D-41A0A0C4DH26 115 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 E7ENQ6 273 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 PDLIM1O00151 329 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 RGS16O15492 202 aaPredicted RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 TTI1O43156 1089 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 NOVP48745 357 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 RPS6KA1Q15418 735 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 DBN1Q16643 649 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 GIMAP8Q8ND71 665 aaPredicted RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 P2RX5Q93086 422 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 OPTNQ96CV9 577 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 IQCDQ96DY2 449 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 RAB3IPQ96QF0 476 aaPredicted RBP15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 NDNQ99608 321 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 CCDC113Q9H0I3 377 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 NRXN2Q9P2S2 1712 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 SCOCQ9UIL1 159 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 PHF24Q9UPV7 400 aa15.12■□□□□ 0.01
GTF3C1-203ENST00000562609 FOCADQ5VW36 1801 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 BHMG1C9JSJ3 638 aaPredicted RBP15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 H0Y3Z8 333 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 ENOX2Q16206 610 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 CMPK2Q5EBM0 449 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 STRIP1Q5VSL9 837 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 NEK8Q86SG6 692 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 PIGOQ8TEQ8 1089 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 TRIM7Q9C029 511 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 RXFP1Q9HBX9 757 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 PREBQ9HCU5 417 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 CYP39A1Q9NYL5 469 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 TDP2O95551 362 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 TAL1P17542 331 aaPredicted RBP15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 PTDSS1P48651 473 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 TNNI2P48788 182 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 NT5C2P49902 561 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 MUM1Q2TAK8 710 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 POTEAQ6S8J7 498 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 DYDC1Q8WWB3 177 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 PGM2Q96G03 612 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 DHTKD1Q96HY7 919 aaPredicted RBP15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 PRMT6Q96LA8 375 aaPredicted RBP15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 NUDCD1Q96RS6 583 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 CELF4Q9BZC1 486 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 GOLPH3Q9H4A6 298 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 GALNT8Q9NY28 637 aa15.11■□□□□ 0.01
GTF3C1-203ENST00000562609 YDJCA8MPS7 323 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 TCP11X1B4DZS4 312 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 KRIT1O00522 736 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 KLRC4O43908 158 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 ATP6V1G1O75348 118 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 EEF2P13639 858 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 LRRC14Q15048 493 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 GALNT17Q6IS24 598 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 KRT25Q7Z3Z0 450 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 BAP1Q92560 729 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 FMO2Q99518 471 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 DMAP1Q9NPF5 467 aaPredicted RBP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 SLC37A4O43826 429 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 OR52Z1P0C646 297 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 ITGA4P13612 1032 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 GM2AP17900 193 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 CCNE1P24864 410 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 CERKLQ49MI3 558 aaPredicted RBP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 PABPC1LQ4VXU2 614 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 HGSNATQ68CP4 663 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 MGARPQ8TDB4 240 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 ASAP3Q8TDY4 903 aa15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 RGS17Q9UGC6 210 aaPredicted RBP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 ARL2BPQ9Y2Y0 163 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms