RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 DHX58Q96C10 678 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 IFT74Q96LB3 600 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 REEP2Q9BRK0 252 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 C17orf75Q9HAS0 396 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 CHST12Q9NRB3 414 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 HPSEQ9Y251 543 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 MICAL3Q7RTP6 2002 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 FAM237AA0A1B0GTK4 181 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 A0A1W2PQ27 194 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 A0A1W2PQ64 194 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 A0A1W2PQD8 194 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 C9IYK1 514 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 GJB5O95377 273 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 PLS3P13797 630 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 PBX2P40425 430 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■□□ 16.1
RABGGTA-218ENST00000560777 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 DEPTORQ8TB45 409 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 DDX12PQ92771 950 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 STAMQ92783 540 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 DNAJC19Q96DA6 116 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 FZD8Q9H461 694 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 AGPAT5Q9NUQ2 364 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 ODF2LQ9ULJ1 636 aa13.2□□□□□ -0.3
RABGGTA-218ENST00000560777 TTC3P53804 2025 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 CCDC169A6NNP5 214 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 TSPAN1O60635 241 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 UPP2O95045 317 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 MYOGP15173 224 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 PFKFB1P16118 471 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 SARSP49591 514 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 ZNF131P52739 623 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 DMP1Q13316 513 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 TPRNQ4KMQ1 711 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 FAM117BQ6P1L5 589 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 ZBTB8OSQ8IWT0 167 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 SPIRE2Q8WWL2 714 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 C1orf112Q9NSG2 853 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 KCNG1Q9UIX4 513 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 PTPRSQ13332 1948 aa13.19□□□□□ -0.3
RABGGTA-218ENST00000560777 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 K7ERI5 159 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 SLC16A4O15374 487 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 B4GALT5O43286 388 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 ERLIN2O94905 339 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 ARF4P18085 180 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 AXLP30530 894 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 NDUFA8P51970 172 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 EFNA5P52803 228 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 HTRA4P83105 476 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 MYCT1Q8N699 235 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 TMEM161BQ8NDZ6 487 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 CPB2Q96IY4 423 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 RAD9AQ99638 391 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 TMEM134Q9H6X4 195 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 PARVGQ9HBI0 331 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 KMT5AQ9NQR1 393 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 ARHGAP28Q9P2N2 729 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 SERTAD1Q9UHV2 236 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 USP20Q9Y2K6 914 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 YBX2Q9Y2T7 364 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 PCDHA11Q9Y5I1 949 aa13.18□□□□□ -0.3
RABGGTA-218ENST00000560777 A0A1B0GUA9 196 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 ACKR2O00590 384 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 TLL1O43897 1013 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 DGKIO75912 1065 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 FAM13AO94988 1023 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 EDN1P05305 212 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 SLFN14P0C7P3 912 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 DNAJB2P25686 324 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 SMTNP53814 917 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 AMPD3Q01432 767 aa13.17□□□□□ -0.3
RABGGTA-218ENST00000560777 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms