RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 OLFML2BQ68BL8 750 aa15.07■□□□□ 0
TPM1-215ENST00000558868 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
TPM1-215ENST00000558868 C17orf53Q8N3J3 647 aaPredicted RBP15.07■□□□□ 0
TPM1-215ENST00000558868 NPLOC4Q8TAT6 608 aa15.07■□□□□ 0
TPM1-215ENST00000558868 BSNDQ8WZ55 320 aa15.07■□□□□ 0
TPM1-215ENST00000558868 BORCS6Q96GS4 357 aa15.07■□□□□ 0
TPM1-215ENST00000558868 ARHGAP28Q9P2N2 729 aa15.07■□□□□ 0
TPM1-215ENST00000558868 ZHX1Q9UKY1 873 aaPredicted RBP15.07■□□□□ 0
TPM1-215ENST00000558868 ZNF215Q9UL58 517 aaPredicted RBP15.07■□□□□ 0
TPM1-215ENST00000558868 TRPC6Q9Y210 931 aa15.07■□□□□ 0
TPM1-215ENST00000558868 N4BP1O75113 896 aaKnown RBP15.06■□□□□ 0
TPM1-215ENST00000558868 GARTP22102 1010 aa15.06■□□□□ 0
TPM1-215ENST00000558868 EFNA5P52803 228 aa15.06■□□□□ 0
TPM1-215ENST00000558868 ENPEPQ07075 957 aa15.06■□□□□ 0
TPM1-215ENST00000558868 E4F1Q66K89 784 aaPredicted RBP15.06■□□□□ 0
TPM1-215ENST00000558868 GBP6Q6ZN66 633 aa15.06■□□□□ 0
TPM1-215ENST00000558868 CACNA2D4Q7Z3S7 1137 aa15.06■□□□□ 0
TPM1-215ENST00000558868 USP37Q86T82 979 aa15.06■□□□□ 0
TPM1-215ENST00000558868 USP6NLQ92738 828 aa15.06■□□□□ 0
TPM1-215ENST00000558868 TMEM143Q96AN5 459 aa15.06■□□□□ 0
TPM1-215ENST00000558868 TMEM134Q9H6X4 195 aa15.06■□□□□ 0
TPM1-215ENST00000558868 PLCB1Q9NQ66 1216 aa15.06■□□□□ 0
TPM1-215ENST00000558868 HSPBP1Q9NZL4 362 aa15.06■□□□□ 0
TPM1-215ENST00000558868 CEP72Q9P209 647 aa15.06■□□□□ 0
TPM1-215ENST00000558868 DAAM1Q9Y4D1 1078 aa15.06■□□□□ 0
TPM1-215ENST00000558868 COL1A2P08123 1366 aa15.06■□□□□ 0
TPM1-215ENST00000558868 IGKV6-21A0A0C4DH24 114 aa15.05■□□□□ -0
TPM1-215ENST00000558868 LRRIQ4A6NIV6 560 aa15.05■□□□□ -0
TPM1-215ENST00000558868 RASSF10A6NK89 507 aa15.05■□□□□ -0
TPM1-215ENST00000558868 TNPO2O14787 897 aaKnown RBP15.05■□□□□ -0
TPM1-215ENST00000558868 MAGEB2O15479 319 aa15.05■□□□□ -0
TPM1-215ENST00000558868 ASAP2O43150 1006 aa15.05■□□□□ -0
TPM1-215ENST00000558868 LGALS2P05162 132 aa15.05■□□□□ -0
TPM1-215ENST00000558868 GLRA2P23416 452 aa15.05■□□□□ -0
TPM1-215ENST00000558868 MARK3P27448 753 aa15.05■□□□□ -0
TPM1-215ENST00000558868 CNGA1P29973 690 aa15.05■□□□□ -0
TPM1-215ENST00000558868 KLK7P49862 253 aa15.05■□□□□ -0
TPM1-215ENST00000558868 SOX10P56693 466 aa15.05■□□□□ -0
TPM1-215ENST00000558868 CDK17Q00537 523 aa15.05■□□□□ -0
TPM1-215ENST00000558868 TNFAIP2Q03169 654 aa15.05■□□□□ -0
TPM1-215ENST00000558868 KCNMA1Q12791 1236 aa15.05■□□□□ -0
TPM1-215ENST00000558868 CETN1Q12798 172 aa15.05■□□□□ -0
TPM1-215ENST00000558868 NOGQ13253 232 aa15.05■□□□□ -0
TPM1-215ENST00000558868 CRHR2Q13324 411 aa15.05■□□□□ -0
TPM1-215ENST00000558868 TFDP1Q14186 410 aa15.05■□□□□ -0
TPM1-215ENST00000558868 PTPN14Q15678 1187 aa15.05■□□□□ -0
TPM1-215ENST00000558868 MEA1Q16626 185 aa15.05■□□□□ -0
TPM1-215ENST00000558868 EXOC3L4Q17RC7 722 aa15.05■□□□□ -0
TPM1-215ENST00000558868 SLFN12LQ6IEE8 588 aa15.05■□□□□ -0
TPM1-215ENST00000558868 PAXIP1Q6ZW49 1069 aaPredicted RBP15.05■□□□□ -0
TPM1-215ENST00000558868 OR6J1Q8NGC5 347 aa15.05■□□□□ -0
TPM1-215ENST00000558868 AFG1LQ8WV93 481 aa15.05■□□□□ -0
TPM1-215ENST00000558868 PSPC1Q8WXF1 523 aaKnown RBP15.05■□□□□ -0
TPM1-215ENST00000558868 SLC35C1Q96A29 364 aa15.05■□□□□ -0
TPM1-215ENST00000558868 BICD1Q96G01 975 aa15.05■□□□□ -0
TPM1-215ENST00000558868 APBA2Q99767 749 aa15.05■□□□□ -0
TPM1-215ENST00000558868 LSM14BQ9BX40 385 aaKnown RBP15.05■□□□□ -0
TPM1-215ENST00000558868 C2orf40Q9H1Z8 148 aa15.05■□□□□ -0
TPM1-215ENST00000558868 KIAA1586Q9HCI6 787 aa15.05■□□□□ -0
TPM1-215ENST00000558868 FAM207AQ9NSI2 230 aaPredicted RBP15.05■□□□□ -0
TPM1-215ENST00000558868 K7ERI5 159 aa15.04■□□□□ -0
TPM1-215ENST00000558868 P4HA2O15460 535 aa15.04■□□□□ -0
TPM1-215ENST00000558868 PIGRP01833 764 aa15.04■□□□□ -0
TPM1-215ENST00000558868 CCDC175P0C221 793 aa15.04■□□□□ -0
TPM1-215ENST00000558868 HOXD8P13378 290 aaPredicted RBP15.04■□□□□ -0
TPM1-215ENST00000558868 SMPD1P17405 629 aa15.04■□□□□ -0
TPM1-215ENST00000558868 HNRNPH3P31942 346 aaKnown RBP15.04■□□□□ -0
TPM1-215ENST00000558868 LIG4P49917 911 aa15.04■□□□□ -0
TPM1-215ENST00000558868 BFSP1Q12934 665 aa15.04■□□□□ -0
TPM1-215ENST00000558868 DGKDQ16760 1214 aa15.04■□□□□ -0
TPM1-215ENST00000558868 TRIM50Q86XT4 487 aa15.04■□□□□ -0
TPM1-215ENST00000558868 ZBTB8OSQ8IWT0 167 aa15.04■□□□□ -0
TPM1-215ENST00000558868 CCDC170Q8IYT3 715 aa15.04■□□□□ -0
TPM1-215ENST00000558868 ASAP3Q8TDY4 903 aa15.04■□□□□ -0
TPM1-215ENST00000558868 SYN2Q92777 582 aaPredicted RBP15.04■□□□□ -0
TPM1-215ENST00000558868 PPP1R13BQ96KQ4 1090 aa15.04■□□□□ -0
TPM1-215ENST00000558868 KIFC3Q9BVG8 833 aa15.04■□□□□ -0
TPM1-215ENST00000558868 AGPAT5Q9NUQ2 364 aa15.04■□□□□ -0
TPM1-215ENST00000558868 TRMT1Q9NXH9 659 aaKnown RBP15.04■□□□□ -0
TPM1-215ENST00000558868 PPP2R2CQ9Y2T4 447 aa15.04■□□□□ -0
TPM1-215ENST00000558868 RNF225M0QZC1 329 aaPredicted RBP15.03■□□□□ -0
TPM1-215ENST00000558868 HNRNPDLO14979 420 aaKnown RBP15.03■□□□□ -0
TPM1-215ENST00000558868 ADCY3O60266 1144 aa15.03■□□□□ -0
TPM1-215ENST00000558868 CYLC1P35663 651 aaPredicted RBP15.03■□□□□ -0
TPM1-215ENST00000558868 VAMP7P51809 220 aa15.03■□□□□ -0
TPM1-215ENST00000558868 FCGRTP55899 365 aa15.03■□□□□ -0
TPM1-215ENST00000558868 MCCD1P59942 119 aaPredicted RBP15.03■□□□□ -0
TPM1-215ENST00000558868 FMNL3Q8IVF7 1028 aa15.03■□□□□ -0
TPM1-215ENST00000558868 PRPF31Q8WWY3 499 aaKnown RBP15.03■□□□□ -0
TPM1-215ENST00000558868 POMGNT1Q8WZA1 660 aa15.03■□□□□ -0
TPM1-215ENST00000558868 CBWD1Q9BRT8 395 aa15.03■□□□□ -0
TPM1-215ENST00000558868 IKZF4Q9H2S9 585 aa15.03■□□□□ -0
TPM1-215ENST00000558868 PCIF1Q9H4Z3 704 aa15.03■□□□□ -0
TPM1-215ENST00000558868 FBXL5Q9UKA1 691 aa15.03■□□□□ -0
TPM1-215ENST00000558868 MYO6Q9UM54 1294 aa15.03■□□□□ -0
TPM1-215ENST00000558868 PLAGL2Q9UPG8 496 aa15.03■□□□□ -0
TPM1-215ENST00000558868 Q9Y3F1 56 aa15.03■□□□□ -0
TPM1-215ENST00000558868 ADGRA3Q8IWK6 1321 aa15.02■□□□□ -0
TPM1-215ENST00000558868 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.02■□□□□ -0
TPM1-215ENST00000558868 SOWAHDA6NJG2 315 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms