RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 ZNF572Q7Z3I7 529 aaPredicted RBP20.93■□□□□ 0.94
FOXN3-214ENST00000557258 MKNK1Q9BUB5 465 aa20.93■□□□□ 0.94
FOXN3-214ENST00000557258 THAP2Q9H0W7 228 aa20.93■□□□□ 0.94
FOXN3-214ENST00000557258 RGPD3A6NKT7 1758 aaPredicted RBP20.93■□□□□ 0.94
FOXN3-214ENST00000557258 RGPD4Q7Z3J3 1758 aa20.93■□□□□ 0.94
FOXN3-214ENST00000557258 GTPBP10A4D1E9 387 aaKnown RBP20.93■□□□□ 0.94
FOXN3-214ENST00000557258 ITGA4P13612 1032 aa20.93■□□□□ 0.94
FOXN3-214ENST00000557258 C1orf220Q5T0J3 134 aa20.93■□□□□ 0.94
FOXN3-214ENST00000557258 METTL13Q8N6R0 699 aa20.93■□□□□ 0.94
FOXN3-214ENST00000557258 PICK1Q9NRD5 415 aa20.93■□□□□ 0.94
FOXN3-214ENST00000557258 GOLGA6BA6NDN3 693 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 RAD51CO43502 376 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 NR3C2P08235 984 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 PTPRAP18433 802 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 COPB2P35606 906 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 DNAJC21Q5F1R6 531 aaKnown RBP20.92■□□□□ 0.94
FOXN3-214ENST00000557258 LMO3Q8TAP4 145 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 SLC35G2Q8TBE7 412 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 ACCSQ96QU6 501 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 TBC1D22BQ9NU19 505 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 TSKSQ9UJT2 592 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 ATMINO43313 823 aaPredicted RBP20.92■□□□□ 0.94
FOXN3-214ENST00000557258 ZNF862O60290 1169 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 ADSSP30520 456 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 FSTL1Q12841 308 aa20.92■□□□□ 0.94
FOXN3-214ENST00000557258 DDX42Q86XP3 938 aaKnown RBP eCLIP20.92■□□□□ 0.94
FOXN3-214ENST00000557258 DDX47Q9H0S4 455 aaKnown RBP20.92■□□□□ 0.94
FOXN3-214ENST00000557258 WDR64B1ANS9 1081 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 BUB1BO60566 1050 aaPredicted RBP20.91■□□□□ 0.94
FOXN3-214ENST00000557258 RGS20O76081 388 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 CAPN2P17655 700 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 PSMC5P62195 406 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 PRPF4BQ13523 1007 aaKnown RBP20.91■□□□□ 0.94
FOXN3-214ENST00000557258 TMEM132BQ14DG7 1078 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 SWSAP1Q6NVH7 229 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 USP38Q8NB14 1042 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 ZNF280CQ8ND82 737 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 CEP170P1Q96L14 293 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 TMEM110-MUSTN1A8MSY1 372 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 NLRX1Q86UT6 975 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 KCTD17Q8N5Z5 321 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 XXYLT1Q8NBI6 393 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 FAM71BQ8TC56 605 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 NEK9Q8TD19 979 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 FBXL5Q9UKA1 691 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 DENND3A2RUS2 1198 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 MUTP22033 750 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 NPTX2P47972 431 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 HNRNPH2P55795 449 aaKnown RBP20.91■□□□□ 0.94
FOXN3-214ENST00000557258 TGFB2P61812 414 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 ZNF211Q13398 564 aaPredicted RBP20.91■□□□□ 0.94
FOXN3-214ENST00000557258 PPP2R5AQ15172 486 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 SCYL3Q8IZE3 742 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 PPM1KQ8N3J5 372 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 RABEP2Q9H5N1 569 aa20.91■□□□□ 0.94
FOXN3-214ENST00000557258 DBR1Q9UK59 544 aaKnown RBP20.91■□□□□ 0.94
FOXN3-214ENST00000557258 UBE4BO95155 1302 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 DLATP10515 647 aaKnown RBP20.9■□□□□ 0.94
FOXN3-214ENST00000557258 TNFAIP3P21580 790 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 LMBRD2Q68DH5 695 aaPredicted RBP20.9■□□□□ 0.94
FOXN3-214ENST00000557258 SLC30A5Q8TAD4 765 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 CASKIN2Q8WXE0 1202 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 VPS33BQ9H267 617 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 ACBD3Q9H3P7 528 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 NENFQ9UMX5 172 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 NOC2LQ9Y3T9 749 aaKnown RBP20.9■□□□□ 0.94
FOXN3-214ENST00000557258 ADGRA3Q8IWK6 1321 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 ITIH3Q06033 890 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 LLGL1Q15334 1064 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 NFIL3Q16649 462 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 AADACL2Q6P093 401 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 CYFIP1Q7L576 1253 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 GOLGA5Q8TBA6 731 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 TMEM117Q9H0C3 514 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 TMEM206Q9H813 350 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 GGA3Q9NZ52 723 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 COG5Q9UP83 839 aa20.9■□□□□ 0.94
FOXN3-214ENST00000557258 TTC19Q6DKK2 380 aaPredicted RBP20.89■□□□□ 0.93
FOXN3-214ENST00000557258 INTS8Q75QN2 995 aaKnown RBP20.89■□□□□ 0.93
FOXN3-214ENST00000557258 ZNF526Q8TF50 670 aaPredicted RBP20.89■□□□□ 0.93
FOXN3-214ENST00000557258 SLC16A10Q8TF71 515 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 CNKSR2Q8WXI2 1034 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 SEMA4DQ92854 862 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 SEPT9Q9UHD8 586 aaPredicted RBP20.89■□□□□ 0.93
FOXN3-214ENST00000557258 ZNF214Q9UL59 606 aaPredicted RBP20.89■□□□□ 0.93
FOXN3-214ENST00000557258 NR2E1Q9Y466 385 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 SNRNP35Q16560 246 aaKnown RBP20.89■□□□□ 0.93
FOXN3-214ENST00000557258 NIPA1Q7RTP0 329 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 VSIG10LQ86VR7 867 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 CTNNBL1Q8WYA6 563 aaPredicted RBP20.89■□□□□ 0.93
FOXN3-214ENST00000557258 PI4K2AQ9BTU6 479 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 DOCK5Q9H7D0 1870 aa20.89■□□□□ 0.93
FOXN3-214ENST00000557258 PFASO15067 1338 aa20.88■□□□□ 0.93
FOXN3-214ENST00000557258 MXI1P50539 228 aa20.88■□□□□ 0.93
FOXN3-214ENST00000557258 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
FOXN3-214ENST00000557258 C10orf76Q5T2E6 689 aa20.88■□□□□ 0.93
FOXN3-214ENST00000557258 CCDC60Q8IWA6 550 aaPredicted RBP20.88■□□□□ 0.93
FOXN3-214ENST00000557258 C4orf19Q8IY42 314 aa20.88■□□□□ 0.93
FOXN3-214ENST00000557258 TMEM161BQ8NDZ6 487 aa20.88■□□□□ 0.93
FOXN3-214ENST00000557258 NLGN2Q8NFZ4 835 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms