RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CACNA1AO00555 2505 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 WDR87Q6ZQQ6 2873 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 A0A087WZ62 844 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 IGKV6-21A0A0C4DH24 114 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 CHMP2AO43633 222 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 PI15O43692 258 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 OFD1O75665 1012 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 NPR3P17342 541 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 KLRC2P26717 231 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 ID4P47928 161 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 FGD1P98174 961 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 DRP2Q13474 957 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 LONRF3Q496Y0 759 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 LRCH2Q5VUJ6 765 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 C15orf39Q6ZRI6 1047 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 ZNF410Q86VK4 478 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 RDM1Q8NG50 284 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 BCL7CQ8WUZ0 217 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-221ENST00000556571 SLC5A5Q92911 643 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 PGBD4Q96DM1 585 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 CCDC136Q96JN2 1154 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 KLHL5Q96PQ7 755 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 FDXACB1Q9BRP7 624 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-221ENST00000556571 KCNK12Q9HB15 430 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 IGSF9Q9P2J2 1179 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 DUSP12Q9UNI6 340 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
ACTN1-221ENST00000556571 INPP5FQ9Y2H2 1132 aa13.37□□□□□ -0.27
ACTN1-221ENST00000556571 SLC11A1P49279 550 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 CLCN4P51793 760 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
ACTN1-221ENST00000556571 ANGPT1Q15389 498 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 LETM2Q2VYF4 491 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 MTERF2Q49AM1 385 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 CATSPER4Q7RTX7 472 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 MIER3Q7Z3K6 550 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 DTWD2Q8NBA8 298 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 URGCPQ8TCY9 931 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 VN1R3Q9BXE9 311 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 UNC45AQ9H3U1 944 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 SUCLA2Q9P2R7 463 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-221ENST00000556571 DNAJB4Q9UDY4 337 aa13.36□□□□□ -0.27
ACTN1-221ENST00000556571 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-221ENST00000556571 ZNF292O60281 2723 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 MEIS3P2A8K0S8 358 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 EDIL3O43854 480 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 LILRB3O75022 631 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 MAFO75444 373 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-221ENST00000556571 PSMD10O75832 226 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 ALDH2P05091 517 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 CNPP09543 421 aaKnown RBP13.35□□□□□ -0.27
ACTN1-221ENST00000556571 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
ACTN1-221ENST00000556571 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 RHPN2Q8IUC4 686 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 SIX5Q8N196 739 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 CMASQ8NFW8 434 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-221ENST00000556571 FEZF2Q8TBJ5 459 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 JPH2Q9BR39 696 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-221ENST00000556571 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 SEMA4AQ9H3S1 761 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 MRPL17Q9NRX2 175 aaKnown RBP13.35□□□□□ -0.27
ACTN1-221ENST00000556571 KANSL3Q9P2N6 904 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 WNT16Q9UBV4 365 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 DPP7Q9UHL4 492 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 FAN1Q9Y2M0 1017 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
ACTN1-221ENST00000556571 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 STBD1O95210 358 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
ACTN1-221ENST00000556571 NEFLP07196 543 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 Q4G0T1 1027 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 ELMSAN1Q6PJG2 1045 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 MRPL10Q7Z7H8 261 aaKnown RBP13.34□□□□□ -0.27
ACTN1-221ENST00000556571 STAMQ92783 540 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 PHKBQ93100 1093 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 FAM193BQ96PV7 902 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-221ENST00000556571 RNF26Q9BY78 433 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-221ENST00000556571 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
ACTN1-221ENST00000556571 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 STK25O00506 426 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 B4GALT3O60512 393 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 DDHD2O94830 711 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 B3GNT9Q6UX72 402 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 AGMOQ6ZNB7 445 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 Q6ZUG5 572 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 KCNG4Q8TDN1 519 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 BRF1Q92994 677 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 GJA10Q969M2 543 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 SH2D3AQ9BRG2 576 aa13.33□□□□□ -0.28
ACTN1-221ENST00000556571 RHOBTB2Q9BYZ6 727 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms