RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 OGFOD1Q8N543 542 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 C1orf131Q8NDD1 294 aaKnown RBP13.37□□□□□ -0.27
HDAC7-230ENST00000552960 SLC35G2Q8TBE7 412 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 FBXO25Q8TCJ0 367 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CCT6BQ92526 530 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 KCTD10Q9H3F6 313 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 GGA2Q9UJY4 613 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
HDAC7-230ENST00000552960 STK38LQ9Y2H1 464 aa13.37□□□□□ -0.27
HDAC7-230ENST00000552960 CENPFP49454 3210 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 WNT10BO00744 389 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 KIF1CO43896 1103 aaKnown RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 AKAP3O75969 853 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 FGFR4P22455 802 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 ADCY1Q08828 1119 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 UBAP2Q5T6F2 1119 aaKnown RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 LRCH2Q5VUJ6 765 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 CTNNBL1Q8WYA6 563 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.36□□□□□ -0.273e-6■■■■■ 50.8
HDAC7-230ENST00000552960 STAMBPL1Q96FJ0 436 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 RAB17Q9H0T7 212 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 DHX36Q9H2U1 1008 aaKnown RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 ERVK-5Q9HDB9 667 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 GOLGA6L10A0A0M3HER8 536 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 RSPH10B2B2RC85 870 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 RSPH10BP0C881 870 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 PEX19P40855 299 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 PMS2P54278 862 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 ELF3P78545 371 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 NAIF1Q69YI7 327 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 SYCE1Q8N0S2 351 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 NEK9Q8TD19 979 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
HDAC7-230ENST00000552960 BZW2Q9Y6E2 419 aaKnown RBP13.36□□□□□ -0.27
HDAC7-230ENST00000552960 F5H6K3 240 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 LRRN2O75325 713 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 MED24O75448 989 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 SLC8A1P32418 973 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 STAT1P42224 750 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 KLRC3Q07444 240 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 C10orf76Q5T2E6 689 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 CUL5Q93034 780 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 TAOK3Q9H2K8 898 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 EVI5O60447 810 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 ATP6V1G2O95670 118 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 POLD1P28340 1107 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 ERMARDQ5T6L9 678 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
HDAC7-230ENST00000552960 FAM129AQ9BZQ8 928 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 SEMA4AQ9H3S1 761 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 MRPL12P52815 198 aaKnown RBP13.35□□□□□ -0.27
HDAC7-230ENST00000552960 PRR16Q569H4 304 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 ARMC9Q7Z3E5 817 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 KIF2BQ8N4N8 673 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 ANKRD42Q8N9B4 389 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 C18orf8Q96DM3 657 aa13.35□□□□□ -0.27
HDAC7-230ENST00000552960 P2RX7Q99572 595 aaKnown RBP13.35□□□□□ -0.27
HDAC7-230ENST00000552960 CNOT10Q9H9A5 744 aaKnown RBP13.35□□□□□ -0.27
HDAC7-230ENST00000552960 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
HDAC7-230ENST00000552960 SUCLA2Q9P2R7 463 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-230ENST00000552960 NDUFB10O96000 172 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
HDAC7-230ENST00000552960 XRCC4Q13426 336 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 ZKSCAN8Q15776 578 aaPredicted RBP13.34□□□□□ -0.27
HDAC7-230ENST00000552960 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
HDAC7-230ENST00000552960 USH1GQ495M9 461 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 ARSHQ5FYA8 562 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 DLK2Q6UY11 383 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 ABCF3Q9NUQ8 709 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
HDAC7-230ENST00000552960 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 WLSQ5T9L3 541 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 RSRC1Q96IZ7 334 aaKnown RBP13.34□□□□□ -0.27
HDAC7-230ENST00000552960 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 REEP2Q9BRK0 252 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 ERP44Q9BS26 406 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 KCNK9Q9NPC2 374 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 CCDC169A6NNP5 214 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 NR3C1P04150 777 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 PTGER2P43116 358 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 PLS1Q14651 629 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 ARHGAP27Q6ZUM4 889 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 NSMCE1Q8WV22 266 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
HDAC7-230ENST00000552960 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
HDAC7-230ENST00000552960 IGSF9BQ9UPX0 1349 aa13.33□□□□□ -0.27
HDAC7-230ENST00000552960 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms