RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 TBC1D13Q9NVG8 400 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 TPCN1Q9ULQ1 816 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 WNT7AO00755 349 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 OFD1O75665 1012 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 CXCL14O95715 111 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 GALTP07902 379 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 EPCAMP16422 314 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 VCPP55072 806 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 PSMC5P62195 406 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 KRT17Q04695 432 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 PPP2R5CQ13362 524 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 MOXD1Q6UVY6 613 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 AGMOQ6ZNB7 445 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 BMP8AQ7Z5Y6 402 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 VPS52Q8N1B4 723 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 TMEM143Q96AN5 459 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 ASIC4Q96FT7 647 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 GBP3Q9H0R5 595 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 ZBP1Q9H171 429 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 CYP26B1Q9NR63 512 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 FAM105AQ9NUU6 356 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 DACT1Q9NYF0 836 aa12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-212ENST00000551111 A0A087WWV3 80 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 DDHD2O94830 711 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 LARGE1O95461 756 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 SRGAP2CP0DJJ0 459 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 HOXA11P31270 313 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 CA8P35219 290 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 PPM1AP35813 382 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 SLC11A1P49279 550 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 ALDH7A1P49419 539 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 NR5A1Q13285 461 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 SMC1AQ14683 1233 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 UBXN11Q5T124 520 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 PIK3AP1Q6ZUJ8 805 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 CATSPER4Q7RTX7 472 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 NECAB1Q8N987 351 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 PRPF31Q8WWY3 499 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 MFSD14AQ96MC6 490 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 TRAIPQ9BWF2 469 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 DHX33Q9H6R0 707 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 CHST12Q9NRB3 414 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
PRPF40B-212ENST00000551111 MYO15AQ9UKN7 3530 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 C2CD4DB7Z1M9 353 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 CCNT1O60563 726 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 ZNF623O75123 536 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 DNM2P50570 870 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 SPIRE1Q08AE8 756 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 TCF15Q12870 199 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 CTTNQ14247 550 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 NOMO2Q5JPE7 1267 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 ZNF410Q86VK4 478 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 SLC22A17Q8WUG5 538 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 DYDC2Q96IM9 177 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 AGPAT5Q9NUQ2 364 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 PCDHB2Q9Y5E7 798 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 COL4A3BPQ9Y5P4 624 aa12.94□□□□□ -0.34
PRPF40B-212ENST00000551111 VPS13AQ96RL7 3174 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 EPB41L2O43491 1005 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 PFKFB2O60825 505 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 ASGR2P07307 311 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 CTSAP10619 480 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 HOXB8P17481 243 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 CYP4A11Q02928 519 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 SIGLEC14Q08ET2 396 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 LAMTOR4Q0VGL1 99 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 PTPN21Q16825 1174 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 NCAPH2Q6IBW4 605 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 PPP4R3AQ6IN85 833 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 NEK8Q86SG6 692 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 DDX53Q86TM3 631 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 FBXL6Q8N531 539 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 CASP10Q92851 521 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 TMEM169Q96HH4 297 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 FAM20AQ96MK3 541 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 LXNQ9BS40 222 aa12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 MRPL9Q9BYD2 267 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-212ENST00000551111 ADAM7Q9H2U9 754 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms