RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 TDRD5Q8NAT2 981 aaKnown RBP13.34□□□□□ -0.27
GABPB1-206ENST00000543881 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 SH2D3AQ9BRG2 576 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-206ENST00000543881 LIMD1Q9UGP4 676 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 DCHS1Q96JQ0 3298 aa13.34□□□□□ -0.27
GABPB1-206ENST00000543881 STK36Q9NRP7 1315 aa13.33□□□□□ -0.27
GABPB1-206ENST00000543881 EML1O00423 815 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 EIF4BP23588 611 aaKnown RBP13.33□□□□□ -0.28
GABPB1-206ENST00000543881 GPC3P51654 580 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 RARS2Q5T160 578 aaKnown RBP13.33□□□□□ -0.28
GABPB1-206ENST00000543881 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 ECHDC2Q86YB7 292 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 SLC39A11Q8N1S5 342 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 PLCD3Q8N3E9 789 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 C12orf76Q8N812 135 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-206ENST00000543881 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 MAP7D2Q96T17 732 aa13.33□□□□□ -0.28
GABPB1-206ENST00000543881 NIFKQ9BYG3 293 aaKnown RBP13.33□□□□□ -0.28
GABPB1-206ENST00000543881 DDX25Q9UHL0 483 aaKnown RBP13.33□□□□□ -0.28
GABPB1-206ENST00000543881 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.28
GABPB1-206ENST00000543881 DMDP11532 3685 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 CDKL5O76039 1030 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 LARGE1O95461 756 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 CXCL14O95715 111 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 FDPSP14324 419 aaKnown RBP13.32□□□□□ -0.28
GABPB1-206ENST00000543881 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-206ENST00000543881 FGFR4P22455 802 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 TMOD1P28289 359 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 ANAPC15P60006 121 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 TBC1D8BQ0IIM8 1120 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 LETM2Q2VYF4 491 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 EARS2Q5JPH6 523 aaKnown RBP13.32□□□□□ -0.28
GABPB1-206ENST00000543881 ATAT1Q5SQI0 421 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 KIAA1841Q6NSI8 718 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 KANK3Q6NY19 840 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 FLCNQ8NFG4 579 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 KCNMB3Q9NPA1 279 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 SEPT9Q9UHD8 586 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-206ENST00000543881 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
GABPB1-206ENST00000543881 IGKV6-21A0A0C4DH24 114 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
GABPB1-206ENST00000543881 DARSP14868 501 aaKnown RBP13.31□□□□□ -0.28
GABPB1-206ENST00000543881 BMS1Q14692 1282 aaKnown RBP13.31□□□□□ -0.28
GABPB1-206ENST00000543881 ME3Q16798 604 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 CLLU1OSQ5K130 101 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 CWF19L1Q69YN2 538 aaKnown RBP13.31□□□□□ -0.28
GABPB1-206ENST00000543881 ANO5Q75V66 913 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 HAS1Q92839 578 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 DZANK1Q9NVP4 752 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 ORC3Q9UBD5 711 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-206ENST00000543881 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
GABPB1-206ENST00000543881 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-206ENST00000543881 CCDC194A0A1B0GVG4 234 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 NT5C1B-RDH14C9J2C7 533 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 PI15O43692 258 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 EOMESO95936 686 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 ALDH7A1P49419 539 aaKnown RBP13.3□□□□□ -0.28
GABPB1-206ENST00000543881 BCAR1P56945 870 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 PPP2R5CQ13362 524 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 PPP4R3AQ6IN85 833 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 TMEM87AQ8NBN3 555 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 HELQQ8TDG4 1101 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 CYP26B1Q9NR63 512 aa13.3□□□□□ -0.28
GABPB1-206ENST00000543881 WRAP73Q9P2S5 460 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-206ENST00000543881 MAFO75444 373 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 SEC24BO95487 1268 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 EPCAMP16422 314 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 NPR3P17342 541 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 AOC1P19801 751 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 PSMC5P62195 406 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 NR5A1Q13285 461 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ANGPT1Q15389 498 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ERICH6BQ5W0A0 696 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 CCDC105Q8IYK2 499 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 VPS52Q8N1B4 723 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 NLRP7Q8WX94 980 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 AUTS2Q8WXX7 1259 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 FAM20AQ96MK3 541 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 DENND4AQ7Z401 1863 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 A0A087WZ62 844 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 A0A0U1RQF3 1178 aa13.29□□□□□ -0.28
GABPB1-206ENST00000543881 CCNT1O60563 726 aaKnown RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
GABPB1-206ENST00000543881 XBP1P17861 261 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms