RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ACP6Q9NPH0 428 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 AMACRQ9UHK6 382 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 TMEM59LQ9UK28 342 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 NR2E1Q9Y466 385 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 UBIAD1Q9Y5Z9 338 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 KRIT1O00522 736 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 TNNC1P63316 161 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 PPP3CAQ08209 521 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 BFSP1Q12934 665 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 ZNF211Q13398 564 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 PRPF4BQ13523 1007 aaKnown RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 ZNF746Q6NUN9 644 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 NT5DC3Q86UY8 548 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 C10orf67Q8IYJ2 551 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 SCFD2Q8WU76 684 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 JDP2Q8WYK2 163 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 AGO4Q9HCK5 861 aaKnown RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 CWC15Q9P013 229 aaKnown RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 SEL1LQ9UBV2 794 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 ODF2LQ9ULJ1 636 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 STXBP5LQ9Y2K9 1186 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 UBE4BO95155 1302 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 GTPBP10A4D1E9 387 aaKnown RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 SORBS3O60504 671 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 PPP1R37O75864 691 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 VCAM1P19320 739 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 GUCY2CP25092 1073 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 FLT3P36888 993 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 USP8P40818 1118 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 IRAK1P51617 712 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 MTMR2Q13614 643 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 PLA2G4FQ68DD2 849 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 PLEKHO2Q8TD55 490 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 RUBCNQ92622 972 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 WNK4Q96J92 1243 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 KCND2Q9NZV8 630 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 APEX2Q9UBZ4 518 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 COG5Q9UP83 839 aa12.5□□□□□ -0.41
C11orf54-214ENST00000540113 RRP15Q9Y3B9 282 aaKnown RBP12.5□□□□□ -0.41
C11orf54-214ENST00000540113 RLFQ13129 1914 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 COL11A1P12107 1806 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-214ENST00000540113 PGRMC1O00264 195 aaKnown RBP12.49□□□□□ -0.41
C11orf54-214ENST00000540113 TULP2O00295 520 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 SLC16A4O15374 487 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 OPA1O60313 960 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 ATP9AO75110 1047 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 TNFAIP3P21580 790 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 ECHS1P30084 290 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 NPEPPSP55786 919 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 SOX10P56693 466 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 GNGT1P63211 74 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 NNTQ13423 1086 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
C11orf54-214ENST00000540113 PCNX4Q63HM2 1172 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 NIPA1Q7RTP0 329 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 LMO3Q8TAP4 145 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 PBKQ96KB5 322 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 TRIM31Q9BZY9 425 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 TMEM110-MUSTN1A8MSY1 372 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 GOLGA8KD6RF30 607 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 MYO1CO00159 1063 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 TTI1O43156 1089 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 CTNND1O60716 968 aaKnown RBP12.49□□□□□ -0.41
C11orf54-214ENST00000540113 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-214ENST00000540113 PDCLQ13371 301 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 TNIP1Q15025 636 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-214ENST00000540113 DCAF12L1Q5VU92 463 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 ALS2CLQ60I27 953 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 SLFN11Q7Z7L1 901 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 SRLQ86TD4 932 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 IQCKQ8N0W5 287 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 NEK9Q8TD19 979 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 ACTRT1Q8TDG2 376 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.49□□□□□ -0.417e-6■■□□□ 11.5
C11orf54-214ENST00000540113 MKNK1Q9BUB5 465 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 CAPS2Q9BXY5 557 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 DPH5Q9H2P9 285 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-214ENST00000540113 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
C11orf54-214ENST00000540113 BACH1O14867 736 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 DAPK3O43293 454 aa12.48□□□□□ -0.41
C11orf54-214ENST00000540113 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-214ENST00000540113 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms