RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 AMPD3Q01432 767 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 GABPAQ06546 454 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 NFIAQ12857 509 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 PDAP1Q13442 181 aaKnown RBP13.61□□□□□ -0.23
DDX55-206ENST00000539934 LBRQ14739 615 aaKnown RBP13.61□□□□□ -0.23
DDX55-206ENST00000539934 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
DDX55-206ENST00000539934 WHAMMP3Q1A5X7 153 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 TRIM71Q2Q1W2 868 aaKnown RBP13.61□□□□□ -0.23
DDX55-206ENST00000539934 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 GPR161Q8N6U8 529 aaKnown RBP13.61□□□□□ -0.23
DDX55-206ENST00000539934 TNIP2Q8NFZ5 429 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 C8orf48Q96LL4 319 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 ASB3Q9Y575 518 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 TEX28O15482 410 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 CMA1P23946 247 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 GRK4P32298 578 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 TOB1P50616 345 aaPredicted RBP13.6□□□□□ -0.23
DDX55-206ENST00000539934 NLRP5P59047 1200 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 IGBP1P78318 339 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 DRP2Q13474 957 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 CCDC153Q494R4 210 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 CCDC14Q49A88 953 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
DDX55-206ENST00000539934 RABGGTAQ92696 567 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 ZHX3Q9H4I2 956 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 IL20Q9NYY1 176 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 TRIM43BA6NCK2 446 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 ACTN4O43707 911 aaKnown RBP13.6□□□□□ -0.23
DDX55-206ENST00000539934 TSPAN1O60635 241 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 CETPP11597 493 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 FUT4P22083 530 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 COG2Q14746 738 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 FKBP15Q5T1M5 1219 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 CEP295NLQ96MC4 621 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 CLIC6Q96NY7 704 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 SDF4Q9BRK5 362 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 FKBP14Q9NWM8 211 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 ZFATQ9P243 1243 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 SERPINA10Q9UK55 444 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 PLIN4Q96Q06 1357 aa13.6□□□□□ -0.23
DDX55-206ENST00000539934 BIRC5O15392 142 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 ZNF254O75437 659 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 AKR1B1P15121 316 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 PFKFB1P16118 471 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 SLC16A2P36021 539 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 PRKCZQ05513 592 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 TCP10Q12799 353 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 DAAM2Q86T65 1068 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 PPP1R14CQ8TAE6 165 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 MAML1Q92585 1016 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 TCF12Q99081 682 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 NAP1L4Q99733 375 aaKnown RBP13.59□□□□□ -0.23
DDX55-206ENST00000539934 ANO10Q9NW15 660 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 hCG_2014768A0A024R1R8 64 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 CCDC162PA2VCL2 907 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 CCDC151A5D8V7 595 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 CUTAO60888 179 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 TADA3O75528 432 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 CYP2C8P10632 490 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 CD97P48960 835 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 SNAPC2Q13487 334 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 PCNX4Q63HM2 1172 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 LMBRD2Q68DH5 695 aaPredicted RBP13.59□□□□□ -0.23
DDX55-206ENST00000539934 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 Q7L0L9 218 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 CABP7Q86V35 215 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 ZSCAN29Q8IWY8 852 aaPredicted RBP13.59□□□□□ -0.23
DDX55-206ENST00000539934 ZNF713Q8N859 430 aaPredicted RBP13.59□□□□□ -0.23
DDX55-206ENST00000539934 HNRNPLLQ8WVV9 542 aaKnown RBP13.59□□□□□ -0.23
DDX55-206ENST00000539934 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 PRO3102Q9H379 93 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 PRR12Q9ULL5 1215 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 GABRQQ9UN88 632 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 PCDHB6Q9Y5E3 794 aa13.59□□□□□ -0.23
DDX55-206ENST00000539934 MYH4Q9Y623 1939 aa13.58□□□□□ -0.23
DDX55-206ENST00000539934 KLRF2D3W0D1 207 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 PDHXO00330 501 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 ZNF202O95125 648 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 HOXC13P31276 330 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 TBX4P57082 545 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 BPIFB4P59827 614 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 UBXN2AP68543 259 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 PLOD1Q02809 727 aaPredicted RBP13.58□□□□□ -0.24
DDX55-206ENST00000539934 TTC39BQ5VTQ0 682 aaPredicted RBP13.58□□□□□ -0.24
DDX55-206ENST00000539934 FAM228AQ86W67 206 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
DDX55-206ENST00000539934 SGCDQ92629 289 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
DDX55-206ENST00000539934 TBC1D31Q96DN5 1066 aa13.58□□□□□ -0.24
DDX55-206ENST00000539934 TYW1Q9NV66 732 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms