RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CDR2LQ86X02 465 aaPredicted RBP15.52■□□□□ 0.08
VPS11-205ENST00000534551 DHX58Q96C10 678 aa15.52■□□□□ 0.08
VPS11-205ENST00000534551 CPB2Q96IY4 423 aa15.52■□□□□ 0.08
VPS11-205ENST00000534551 FAM161BQ96MY7 647 aa15.52■□□□□ 0.08
VPS11-205ENST00000534551 INO80BQ9C086 356 aaPredicted RBP15.52■□□□□ 0.08
VPS11-205ENST00000534551 AGPAT5Q9NUQ2 364 aa15.52■□□□□ 0.08
VPS11-205ENST00000534551 CCDC39Q9UFE4 941 aa15.52■□□□□ 0.08
VPS11-205ENST00000534551 TRIP11Q15643 1979 aa15.52■□□□□ 0.07
VPS11-205ENST00000534551 TDRD15B5MCY1 1934 aaKnown RBP15.51■□□□□ 0.07
VPS11-205ENST00000534551 TLL1O43897 1013 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 CA3P07451 260 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 GUCY2CP25092 1073 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 E2F4Q16254 413 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 AMHR2Q16671 573 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 LONRF3Q496Y0 759 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 RESP18Q5W5W9 173 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 SRGAP1Q7Z6B7 1085 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 TIFAQ96CG3 184 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 FTHL17Q9BXU8 183 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 CCDC113Q9H0I3 377 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 TTYH1Q9H313 450 aaPredicted RBP15.51■□□□□ 0.07
VPS11-205ENST00000534551 HCSTQ9UBK5 93 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 STK17AQ9UEE5 414 aa15.51■□□□□ 0.07
VPS11-205ENST00000534551 PLXNA4Q9HCM2 1894 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
VPS11-205ENST00000534551 MYMKA6NI61 221 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 CCDC169A6NNP5 214 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 MEIS3P2A8K0S8 358 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 C9IYK1 514 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 ASAP2O43150 1006 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 ATF7P17544 494 aaPredicted RBP15.5■□□□□ 0.07
VPS11-205ENST00000534551 NAMPTP43490 491 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 NPTX2P47972 431 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 SARSP49591 514 aaKnown RBP15.5■□□□□ 0.07
VPS11-205ENST00000534551 PAN2Q504Q3 1202 aaKnown RBP15.5■□□□□ 0.07
VPS11-205ENST00000534551 CCDC73Q6ZRK6 1079 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 DYMQ7RTS9 669 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 TAS1R3Q7RTX0 852 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
VPS11-205ENST00000534551 DEPTORQ8TB45 409 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 PHOSPHO2Q8TCD6 241 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 KIFAP3Q92845 792 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 TOP1MTQ969P6 601 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 ZBED2Q9BTP6 218 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 GOLPH3LQ9H4A5 285 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 RGS18Q9NS28 235 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 RNF19AQ9NV58 838 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 ATP6V1DQ9Y5K8 247 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 REV3LO60673 3130 aa15.5■□□□□ 0.07
VPS11-205ENST00000534551 A0A1B0GVL5 298 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 SLC16A4O15374 487 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 POLR2DO15514 142 aaKnown RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 ERLIN2O94905 339 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 KRT18P05783 430 aaKnown RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 FGFR1P11362 822 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 PFKFB1P16118 471 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 CASP1P29466 404 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 HOXA11P31270 313 aaPredicted RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 CDC42EP1Q00587 391 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 DMP1Q13316 513 aaPredicted RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 GIT2Q14161 759 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 TWF2Q6IBS0 349 aaKnown RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 ZBTB8OSQ8IWT0 167 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 GRAMD1CQ8IYS0 662 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 CRIPAKQ8N1N5 446 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 RNF169Q8NCN4 708 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 LPPQ93052 612 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 IFT74Q96LB3 600 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 DRC1Q96MC2 740 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 EIF2AQ9BY44 585 aaKnown RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 NFKBIZQ9BYH8 718 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 ZHX3Q9H4I2 956 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 CERS4Q9HA82 394 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 RC3H2Q9HBD1 1191 aaKnown RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 CIZ1Q9ULV3 898 aaPredicted RBP15.49■□□□□ 0.07
VPS11-205ENST00000534551 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
VPS11-205ENST00000534551 PDCD11Q14690 1871 aaKnown RBP15.48■□□□□ 0.07
VPS11-205ENST00000534551 CITO14578 2027 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 FAM13AO94988 1023 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 PRKCBP05771 671 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 ARF4P18085 180 aaPredicted RBP15.48■□□□□ 0.07
VPS11-205ENST00000534551 HTRA4P83105 476 aaPredicted RBP15.48■□□□□ 0.07
VPS11-205ENST00000534551 PPP2R5AQ15172 486 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 RAB30Q15771 203 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 ODR4Q5SWX8 454 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 UBXN11Q5T124 520 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 PPP2R2DQ66LE6 453 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 ECHDC2Q86YB7 292 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 NPAS4Q8IUM7 802 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 YME1L1Q96TA2 773 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 SCAND2PQ9GZW5 306 aaPredicted RBP15.48■□□□□ 0.07
VPS11-205ENST00000534551 KMT5AQ9NQR1 393 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 C1orf112Q9NSG2 853 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 MSRAQ9UJ68 235 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 MTUS1Q9ULD2 1270 aa15.48■□□□□ 0.07
VPS11-205ENST00000534551 PHLPP2Q6ZVD8 1323 aa15.47■□□□□ 0.07
VPS11-205ENST00000534551 CNTNAP2Q9UHC6 1331 aa15.47■□□□□ 0.07
VPS11-205ENST00000534551 EPOPA6NHQ4 379 aa15.47■□□□□ 0.07
VPS11-205ENST00000534551 PLS3P13797 630 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms