RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 SYNGAP1Q96PV0 1343 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 CLGNO14967 610 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 MAP2K2P36507 400 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 TRIM59Q8IWR1 403 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 ANAPC7Q9UJX3 599 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 RNF225M0QZC1 329 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 EIF3DO15371 548 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 RFX1P22670 979 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 PBX1P40424 430 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 IGBP1P78318 339 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 IFT88Q13099 833 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 MTMR2Q13614 643 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 TRIP13Q15645 432 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 MEA1Q16626 185 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 MSTO1Q9BUK6 570 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 ATP6V0A4Q9HBG4 840 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 KCND2Q9NZV8 630 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 PON1P27169 355 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 STX2P32856 288 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 IRF2BP1Q8IU81 584 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLC35G2Q8TBE7 412 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 RIT2Q99578 217 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 AGPAT1Q99943 283 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 INTS9Q9NV88 658 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 HSPBP1Q9NZL4 362 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 PCDHA10Q9Y5I2 948 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 DAPK3O43293 454 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 STAM2O75886 525 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 AKAP3O75969 853 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 CD58P19256 250 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 PROCA1Q8NCQ7 364 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 NAGPAQ9UK23 515 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 COL18A1P39060 1754 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 FAM86B1E9PN63 330 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 FAM86B2P0C5J1 330 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 ANXA13P27216 316 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 NAA25Q14CX7 972 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 HAS1Q92839 578 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 RNPC3Q96LT9 517 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 MKNK1Q9BUB5 465 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 MRIQ9BWK5 157 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 PACSIN1Q9BY11 444 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 MRPL47Q9HD33 250 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 CTNND1O60716 968 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 POLR2BP30876 1174 aaKnown RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 MAN1A1P33908 653 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 Q4G0T1 1027 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 TAB3Q8N5C8 712 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZNF564Q8TBZ8 553 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 LPAR1Q92633 364 aa12.11□□□□□ -0.47
PCDHGB4-201ENST00000519479 A0A1B0GUA9 196 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 CYP26A1O43174 497 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 ABL1P00519 1130 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 SRGAP2CP0DJJ0 459 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 ABCD1P33897 745 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 KCTD2Q14681 263 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 WDR59Q6PJI9 974 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 RUBCNQ92622 972 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 NUP85Q9BW27 656 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 TRIM6Q9C030 488 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 BUB1BO60566 1050 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 SASH3O75995 380 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 ARP10275 920 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 OSTNP61366 133 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 KIF22Q14807 665 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 HADHQ16836 314 aaKnown RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 APBB1IPQ7Z5R6 666 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 RSAD2Q8WXG1 361 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 MED15Q96RN5 788 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 NXF1Q9UBU9 619 aaKnown RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 P4HA1P13674 534 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 HMGCS2P54868 508 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 EIF3BP55884 814 aaKnown RBP12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 MIIPQ5JXC2 388 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 HHATQ5VTY9 493 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 CCDC13Q8IYE1 715 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 CCDC63Q8NA47 563 aa12.1□□□□□ -0.47
PCDHGB4-201ENST00000519479 FBXL13Q8NEE6 735 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms