RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 DTNBP1Q96EV8 351 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 SUDS3Q9H7L9 328 aaPredicted RBP9.11□□□□□ -0.95
PCM1-212ENST00000519253 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.11□□□□□ -0.95
PCM1-212ENST00000519253 SERPINA10Q9UK55 444 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
PCM1-212ENST00000519253 SETD1BQ9UPS6 1966 aaKnown RBP9.11□□□□□ -0.95
PCM1-212ENST00000519253 POTEFA5A3E0 1075 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 FBXO25Q8TCJ0 367 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 ERP27Q96DN0 273 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 ZFATQ9P243 1243 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 UVRAGQ9P2Y5 699 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 MCM8Q9UJA3 840 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 PALM3A6NDB9 673 aaPredicted RBP9.11□□□□□ -0.95
PCM1-212ENST00000519253 UBOX5O94941 541 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 GSCP56915 257 aaPredicted RBP9.11□□□□□ -0.95
PCM1-212ENST00000519253 KRT17Q04695 432 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 HADHQ16836 314 aaKnown RBP9.11□□□□□ -0.95
PCM1-212ENST00000519253 LONRF1Q17RB8 773 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 ERMARDQ5T6L9 678 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 RIBC1Q8N443 379 aaPredicted RBP9.11□□□□□ -0.95
PCM1-212ENST00000519253 ATL2Q8NHH9 583 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 RAB3IL1Q8TBN0 382 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 STAMBPL1Q96FJ0 436 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 PAGR1Q9BTK6 254 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 THEGQ9P2T0 379 aa9.11□□□□□ -0.95
PCM1-212ENST00000519253 NID2Q14112 1375 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 BTNL10A8MVZ5 291 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 PLS3P13797 630 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 RBM26Q5T8P6 1007 aaKnown RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 KCTD17Q8N5Z5 321 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 ATXN2LQ8WWM7 1075 aaKnown RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 GLG1Q92896 1179 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 FGD4Q96M96 766 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 APEX2Q9UBZ4 518 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 H0YCG3 227 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 RTN2O75298 545 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 XRCC4Q13426 336 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 NAF1Q96HR8 494 aaKnown RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 NUP85Q9BW27 656 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 MAD2L2Q9UI95 211 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 ANAPC7Q9UJX3 599 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 CCDC22O60826 627 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 LCA5LO95447 670 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 TNNI1P19237 187 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 PAX7P23759 505 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 ICA1Q05084 483 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 PDCD2Q16342 344 aaPredicted RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 NAIF1Q69YI7 327 aaPredicted RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 KCTD1Q719H9 257 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 ZNF571Q7Z3V5 609 aaPredicted RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 RNF168Q8IYW5 571 aaPredicted RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 CHURC1Q8WUH1 139 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 BAP1Q92560 729 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 A0A0G2JND7 137 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 LACTB2Q53H82 288 aaPredicted RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 NME8Q8N427 588 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 VGLL2Q8N8G2 317 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 MRPL11Q9Y3B7 192 aaKnown RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 GRIN2DO15399 1336 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 NVLO15381 856 aaKnown RBP9.1□□□□□ -0.95
PCM1-212ENST00000519253 MARK3P27448 753 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 FMO5P49326 533 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 CCDC14Q49A88 953 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 PDIK1LQ8N165 341 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 PPP4R1Q8TF05 950 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 OLFM3Q96PB7 478 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 TTYH3Q9C0H2 523 aa9.1□□□□□ -0.95
PCM1-212ENST00000519253 IQANK1A0A1B0GTG1 560 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 DDX39AO00148 427 aaKnown RBP9.09□□□□□ -0.95
PCM1-212ENST00000519253 TBX3O15119 743 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 RPS6KC1Q96S38 1066 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 RXFP1Q9HBX9 757 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 PFDN1O60925 122 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 EYA4O95677 639 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 ARFIP2P53365 341 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 GTF2IP78347 998 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 RIPK1Q13546 671 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 CERKLQ49MI3 558 aaPredicted RBP9.09□□□□□ -0.95
PCM1-212ENST00000519253 TRAPPC3LQ5T215 181 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 KAZNQ674X7 775 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 PYROXD1Q8WU10 500 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 TEKT1Q969V4 418 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 SLAIN2Q9P270 581 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 SCINQ9Y6U3 715 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 SGK1O00141 431 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 MYCNP04198 464 aaPredicted RBP9.09□□□□□ -0.95
PCM1-212ENST00000519253 PON1P27169 355 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 COILP38432 576 aaPredicted RBP9.09□□□□□ -0.95
PCM1-212ENST00000519253 RCN2Q14257 317 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 KLHL38Q2WGJ6 581 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 XXYLT1Q8NBI6 393 aa9.09□□□□□ -0.95
PCM1-212ENST00000519253 RBM41Q96IZ5 413 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms