RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
SDHA-218ENST00000515752 SNX12Q9UMY4 172 aa16.62■□□□□ 0.25
SDHA-218ENST00000515752 USP20Q9Y2K6 914 aa16.62■□□□□ 0.25
SDHA-218ENST00000515752 A0A0G2JMZ2 1700 aa16.62■□□□□ 0.25
SDHA-218ENST00000515752 IGKV6D-21A0A0A0MT36 114 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 CCDC151A5D8V7 595 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 IQCA1LA6NCM1 817 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 KIAA0391O15091 583 aaKnown RBP16.61■□□□□ 0.25
SDHA-218ENST00000515752 YBX3P16989 372 aaKnown RBP eCLIP16.61■□□□□ 0.257e-8■□□□□ 8.2
SDHA-218ENST00000515752 MCM3P25205 808 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 CLCN6P51797 869 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 CBWD3Q5JTY5 395 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 CBWD5Q5RIA9 395 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 CYFIP1Q7L576 1253 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 RDH13Q8NBN7 331 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 MSANTD4Q8NCY6 345 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 SH2D3AQ9BRG2 576 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 NIFKQ9BYG3 293 aaKnown RBP16.61■□□□□ 0.25
SDHA-218ENST00000515752 PCIF1Q9H4Z3 704 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 NRBP2Q9NSY0 501 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 RNF14Q9UBS8 474 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 DNAJC12Q9UKB3 198 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
SDHA-218ENST00000515752 F8VZ95 297 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 MOCS3O95396 460 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 OATP04181 439 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 TRIM49P0CI25 452 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 TRIM49CP0CI26 452 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 GARTP22102 1010 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 GTF2H1P32780 548 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 NAP1L1P55209 391 aaKnown RBP16.61■□□□□ 0.25
SDHA-218ENST00000515752 SP2Q02086 613 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 ITIH3Q06033 890 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 FAM160B1Q5W0V3 765 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 SEPT14Q6ZU15 432 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 TRMT1LQ7Z2T5 733 aaKnown RBP16.61■□□□□ 0.25
SDHA-218ENST00000515752 ZNF571Q7Z3V5 609 aaPredicted RBP16.61■□□□□ 0.25
SDHA-218ENST00000515752 TMC2Q8TDI7 906 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 PARD6BQ9BYG5 372 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 MLXIPQ9HAP2 919 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 KIAA1586Q9HCI6 787 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 NAGPAQ9UK23 515 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 HYOU1Q9Y4L1 999 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 CAPN6Q9Y6Q1 641 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 SYNGAP1Q96PV0 1343 aa16.61■□□□□ 0.25
SDHA-218ENST00000515752 RFC5P40937 340 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 POLGP54098 1239 aaPredicted RBP16.6■□□□□ 0.25
SDHA-218ENST00000515752 SP4Q02446 784 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 DRAP1Q14919 205 aaPredicted RBP16.6■□□□□ 0.25
SDHA-218ENST00000515752 SNRNP35Q16560 246 aaKnown RBP16.6■□□□□ 0.25
SDHA-218ENST00000515752 ALKBH5Q6P6C2 394 aaKnown RBP16.6■□□□□ 0.25
SDHA-218ENST00000515752 EXOC8Q8IYI6 725 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 SLC7A3Q8WY07 619 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 FBXL18Q96ME1 805 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 PAGR1Q9BTK6 254 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 MROH8Q9H579 483 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 ARFGAP3Q9NP61 516 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 EMSYQ7Z589 1322 aa16.6■□□□□ 0.25
SDHA-218ENST00000515752 PTPRFP10586 1907 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 SOWAHBA6NEL2 793 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 ERLIN1O75477 346 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 METTL7BQ6UX53 244 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 DLK2Q6UY11 383 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 PNMA8AQ86V59 439 aaPredicted RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 AFAP1L1Q8TED9 768 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 FAM167AQ96KS9 214 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 XPNPEP1Q9NQW7 623 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 HDAC6Q9UBN7 1215 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 RAB21Q9UL25 225 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 PCDHGC5Q9Y5F6 944 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 A0A0A6YYK5 440 aaPredicted RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 EVI5O60447 810 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 FARP2O94887 1054 aaPredicted RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 MXI1P50539 228 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 SNAPC2Q13487 334 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 KCTD2Q14681 263 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 EMC2Q15006 297 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 ENOX2Q16206 610 aaKnown RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 CCDC70Q6NSX1 233 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 ZNF572Q7Z3I7 529 aaPredicted RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 LMO3Q8TAP4 145 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 LMBR1Q8WVP7 490 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 POLR3FQ9H1D9 316 aaPredicted RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 DHX33Q9H6R0 707 aaKnown RBP16.59■□□□□ 0.25
SDHA-218ENST00000515752 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
SDHA-218ENST00000515752 CNMDO75829 334 aa16.58■□□□□ 0.24
SDHA-218ENST00000515752 ZSCAN20P17040 1043 aaPredicted RBP16.58■□□□□ 0.24
SDHA-218ENST00000515752 ADSSP30520 456 aa16.58■□□□□ 0.24
SDHA-218ENST00000515752 NAMPTP43490 491 aa16.58■□□□□ 0.24
SDHA-218ENST00000515752 STRN3Q13033 797 aa16.58■□□□□ 0.24
SDHA-218ENST00000515752 MTERF2Q49AM1 385 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms