RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 FAM228AQ86W67 206 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 KSR1Q8IVT5 923 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 TOP1MTQ969P6 601 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 CEP170P1Q96L14 293 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 SLC28A3Q9HAS3 691 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 ERVK-5Q9HDB9 667 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 EVA1BQ9NVM1 165 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 SQORQ9Y6N5 450 aa12.32□□□□□ -0.44
UBE2D3-232ENST00000514755 EPOPA6NHQ4 379 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 RFXAPO00287 272 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 RPS6KA5O75582 802 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 FGFR4P22455 802 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 CRYBB1P53674 252 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 TAP1Q03518 808 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 PAK2Q13177 524 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 ECM1Q16610 540 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 FERMT3Q86UX7 667 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 SNX21Q969T3 373 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 MAP7D2Q96T17 732 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 XPNPEP1Q9NQW7 623 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 ST3GAL5Q9UNP4 418 aa12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 FCF1Q9Y324 198 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-232ENST00000514755 COL4A6Q14031 1691 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 A0A087WZ62 844 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 PP2D1A8MPX8 630 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 DKC1O60832 514 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 LYPLA2O95372 231 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 TMOD1P28289 359 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 RILPL1Q5EBL4 403 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 XKR9Q5GH70 373 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 TMEM143Q96AN5 459 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 FDXACB1Q9BRP7 624 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 TTC3P53804 2025 aa12.3□□□□□ -0.44
UBE2D3-232ENST00000514755 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 LINC01553A4QN01 128 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 SYT1P21579 422 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 IBSPP21815 317 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 CDC25AP30304 524 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 RARRES1P49788 294 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 POLGP54098 1239 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 EMC2Q15006 297 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 OTUD6AQ7L8S5 288 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 CRIPAKQ8N1N5 446 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 NEK9Q8TD19 979 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 INTS4Q96HW7 963 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 RAD9AQ99638 391 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 STXBP5LQ9Y2K9 1186 aa12.29□□□□□ -0.44
UBE2D3-232ENST00000514755 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 EIF4BP23588 611 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 RPA1P27694 616 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 GATMP50440 423 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 ATP2C1P98194 919 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 KCNH2Q12809 1159 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 RESTQ13127 1097 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 DSC3Q14574 896 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 IGSF22Q8N9C0 903 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 SLC7A3Q8WY07 619 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 ARNTL2Q8WYA1 636 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 NLRP4Q96MN2 994 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 ADAM2Q99965 735 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 FTHL17Q9BXU8 183 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 ANKEF1Q9NU02 776 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 MAP10Q9P2G4 905 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 LRWD1Q9UFC0 647 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 MTUS1Q9ULD2 1270 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 INSL6Q9Y581 213 aa12.28□□□□□ -0.44
UBE2D3-232ENST00000514755 GPR182O15218 404 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 LINC00271P0C7V0 271 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 FOSL2P15408 326 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 GRIN1Q05586 938 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 MAEAQ7L5Y9 396 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 SNX29Q8TEQ0 813 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 PRPF31Q8WWY3 499 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 ZNF689Q96CS4 500 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 YME1L1Q96TA2 773 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 C17orf80Q9BSJ5 609 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 MINDY3Q9H8M7 445 aa12.27□□□□□ -0.45
UBE2D3-232ENST00000514755 GPRC5CQ9NQ84 441 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms