RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ZCWPW2Q504Y3 356 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 DAB2IPQ5VWQ8 1189 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 TTC27Q6P3X3 843 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 ATG4AQ8WYN0 398 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 ERGIC2Q96RQ1 377 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 NUDT12Q9BQG2 462 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 ERP44Q9BS26 406 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 ARL8BQ9NVJ2 186 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 PRKAG3Q9UGI9 489 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 UTRNP46939 3433 aa7.79□□□□□ -1.16
LIMCH1-207ENST00000508466 SFI1A8K8P3 1242 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 H0YIN7 160 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 XPOTO43592 962 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 EXOC3O60645 756 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 STAMBPO95630 424 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ITGA2BP08514 1039 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 CHRNB2P17787 502 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ASIC2Q16515 512 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 SLC18A3Q16572 532 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 SH3D19Q5HYK7 790 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 KIAA1755Q5JYT7 1200 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 IFIT1BQ5T764 474 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ZNF746Q6NUN9 644 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 CABP7Q86V35 215 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 GLYCTKQ8IVS8 523 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ZFPM1Q8IX07 1006 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ENAHQ8N8S7 591 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ALG3Q92685 438 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 STMN2Q93045 179 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 MCUR1Q96AQ8 359 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TRIM9Q9C026 710 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 DHX36Q9H2U1 1008 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ZDHHC18Q9NUE0 388 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 CWC25Q9NXE8 425 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TAS2R14Q9NYV8 317 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 RASAL2Q9UJF2 1139 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 PHTF1Q9UMS5 762 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 NIP7Q9Y221 180 aaKnown RBP eCLIP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 LZTS1Q9Y250 596 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ATP6V0A2Q9Y487 856 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 PPLO60437 1756 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 IGSF9BQ9UPX0 1349 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 OVOS2A0A0J9YW53 1432 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 OVOS2Q6IE36 1432 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TSPY2A6NKD2 308 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 SIGLEC16A6NMB1 481 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 GSG1L2A8MUP6 293 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 MAP3K7O43318 606 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 RIPK2O43353 540 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 CCNT1O60563 726 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TSPY3P0CV98 308 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TSPY8P0CW00 308 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 FGFR1P11362 822 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ACADSP16219 412 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TAC1P20366 129 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 CLCN2P51788 898 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 ADARP55265 1226 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TSPY1Q01534 308 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 GIT2Q14161 759 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 LIN52Q52LA3 116 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 PLEKHG4Q58EX7 1191 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 C6orf118Q5T5N4 469 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 IRGCQ6NXR0 463 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 HEATR3Q7Z4Q2 680 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 SGMS1Q86VZ5 419 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 CPNE9Q8IYJ1 553 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 PIP4K2CQ8TBX8 421 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 HAUS1Q96CS2 278 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 FAM161BQ96MY7 647 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 UBA5Q9GZZ9 404 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 USP40Q9NVE5 1235 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 GRID1Q9ULK0 1009 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 LRCH1Q9Y2L9 728 aa7.78□□□□□ -1.16
LIMCH1-207ENST00000508466 MYMKA6NI61 221 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 GYG2O15488 501 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 CYP26A1O43174 497 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 OAS1P00973 400 aaKnown RBP7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 SERPING1P05155 500 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 VAV1P15498 845 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 VARSP26640 1264 aaKnown RBP7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 PCSK6P29122 969 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 WDR4P57081 412 aaKnown RBP7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 CDR2Q01850 454 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 ZBTB16Q05516 673 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 KDSRQ06136 332 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 GK3PQ14409 553 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 ZNF362Q5T0B9 420 aaPredicted RBP7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 C4orf50Q6ZRC1 276 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 RINLQ6ZS11 566 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 PPFIBP2Q8ND30 876 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 CFAP61Q8NHU2 1237 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 RFWD2Q8NHY2 731 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 PYDC1Q8WXC3 89 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 GATA6Q92908 595 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 VCX3BQ9H321 246 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 VCX3AQ9NNX9 186 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 STOML1Q9UBI4 398 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms