RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 ZNF510Q9Y2H8 683 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 TMEM98Q9Y2Y6 226 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 GREB1LQ9C091 1923 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 QSER1Q2KHR3 1735 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SSU72P8A0A1W2PR75 194 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 ZSCAN5CA6NGD5 496 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 A6NHS1 94 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 PALMO75781 387 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 GCNT3O95395 438 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 GJA8P48165 433 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SEC24CP53992 1094 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 DEUP1Q05D60 604 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 KLHL30Q0D2K2 578 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SFSWAPQ12872 951 aaKnown RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 MYO1EQ12965 1108 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 PPFIA1Q13136 1202 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SF3B2Q13435 895 aaKnown RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 PLCB4Q15147 1175 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 KNOP1Q1ED39 458 aaKnown RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 KIAA0753Q2KHM9 967 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SPRED3Q2MJR0 410 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 PPP1R15BQ5SWA1 713 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 MIGA2Q7L4E1 593 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 TRMT1LQ7Z2T5 733 aaKnown RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 TMEM110Q86TL2 294 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 TPH2Q8IWU9 490 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 LARGE2Q8N3Y3 721 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 NME8Q8N427 588 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SYT2Q8N9I0 419 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 IQCDQ96DY2 449 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 RPGRIP1Q96KN7 1286 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 CEP63Q96MT8 703 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 ZNF570Q96NI8 536 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SELENOOQ9BVL4 669 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 TRIM7Q9C029 511 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 UBE2OQ9C0C9 1292 aaKnown RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 HAUS2Q9NVX0 235 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 KLHL42Q9P2K6 505 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 ARMCX3Q9UH62 379 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 VAV3Q9UKW4 847 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 PCDHB13Q9Y5F0 798 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 PITPNM2Q9BZ72 1349 aa5.59□□□□□ -1.52
CLDND1-208ENST00000503004 BRWD3Q6RI45 1802 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 ESYT3A0FGR9 886 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 AGPSO00116 658 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 BACH1O14867 736 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 RAD17O75943 681 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 SERPING1P05155 500 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 UCHL3P15374 230 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 NMT1P30419 496 aaKnown RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 SLC8A1P32418 973 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 STAT2P52630 851 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 MARSP56192 900 aaKnown RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 PTK2Q05397 1052 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 SLC18A3Q16572 532 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 Q4G0T1 1027 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 ZC2HC1CQ53FD0 456 aaPredicted RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GJB7Q6PEY0 223 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 CCNI2Q6ZMN8 369 aaPredicted RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 B4GALNT4Q76KP1 1039 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 NOP9Q86U38 636 aaKnown RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GALNT15Q8N3T1 639 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GMCL1P1Q8NEA9 526 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 ERMNQ8TAM6 284 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GIPC2Q8TF65 315 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 SLC35B4Q969S0 331 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GMCL1Q96IK5 515 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 NOX5Q96PH1 765 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 NAP1L4Q99733 375 aaKnown RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 EIF2AK1Q9BQI3 630 aaKnown RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 WDR18Q9BV38 432 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GLT8D2Q9H1C3 349 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 EBF2Q9HAK2 575 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.521e-6■■■□□ 18.4
CLDND1-208ENST00000503004 PCMTD2Q9NV79 361 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 FBXO28Q9NVF7 368 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 RABGAP1Q9Y3P9 1069 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 SLX4Q8IY92 1834 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 C10orf71Q711Q0 1435 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 IGLV3-22A0A075B6J6 115 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 PJA2O43164 708 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 PPIP5K2O43314 1243 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 PEX14O75381 377 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GNA14O95837 355 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 TUBBP07437 444 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 XRCC5P13010 732 aaKnown RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GUCY1A3Q02108 690 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 COG2Q14746 738 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 EDRF1Q3B7T1 1238 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 MOXD1Q6UVY6 613 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 YTHDF3Q7Z739 585 aaKnown RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 SAPCD2Q86UD0 394 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 CCDC50Q8IVM0 306 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 ZFAND2BQ8WV99 257 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 TSC22D3Q99576 134 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 SH2D3AQ9BRG2 576 aa5.58□□□□□ -1.52
CLDND1-208ENST00000503004 GLIS2Q9BZE0 524 aaPredicted RBP5.58□□□□□ -1.52
CLDND1-208ENST00000503004 PDGFDQ9GZP0 370 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms