RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ATP6V1G2O95670 118 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 CYP2D6P10635 497 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 GARSP41250 739 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 SYDE1Q6ZW31 735 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 PRPF38AQ8NAV1 312 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 ZNF564Q8TBZ8 553 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 SERPINI1Q99574 410 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 PABPC3Q9H361 631 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 CFAP69A5D8W1 941 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 UCHL3P15374 230 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 MDM2Q00987 491 aaPredicted RBP18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 ASPHQ12797 758 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 KLHL38Q2WGJ6 581 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 TTC17Q96AE7 1141 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 SPON1Q9HCB6 807 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 GGA2Q9UJY4 613 aa18.4■□□□□ 0.54
HMGXB3-201ENST00000502717 GOLGA8QA0A0J9YX86 632 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 TMEM120BA0PK00 339 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 GOLGA8OA6NCC3 632 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 GOLGA8NF8WBI6 632 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 TJP3O95049 919 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 GLI1P08151 1106 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 ARL4CP56559 192 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 RCSD1Q6JBY9 416 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 FAM161BQ96MY7 647 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 SMG5Q9UPR3 1016 aaKnown RBP18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 PCDHB4Q9Y5E5 795 aa18.39■□□□□ 0.54
HMGXB3-201ENST00000502717 CDK8P49336 464 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 PDE1BQ01064 536 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 TRAIPQ9BWF2 469 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 FAM129AQ9BZQ8 928 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 SRRM3A6NNA2 597 aaPredicted RBP18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 TRPA1O75762 1119 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 SERPINB2P05120 415 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 ACTN1P12814 892 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 ZYXQ15942 572 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 TTI2Q6NXR4 508 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 SLC35G2Q8TBE7 412 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 ANO3Q9BYT9 981 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 TACC3Q9Y6A5 838 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 JCADQ9P266 1359 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 KRT37O76014 449 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 TFRCP02786 760 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 ITIH2P19823 946 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 NSMFQ6X4W1 530 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 WDR75Q8IWA0 830 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 MAP7D3Q8IWC1 876 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 PROCA1Q8NCQ7 364 aaPredicted RBP18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 ZKSCAN4Q969J2 545 aaPredicted RBP18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 ERP27Q96DN0 273 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 LRGUKQ96M69 825 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 ANKRD27Q96NW4 1050 aa18.39■□□□□ 0.53
HMGXB3-201ENST00000502717 MCF2LO15068 1137 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 PIK3CAP42336 1068 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 BASP1P80723 227 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 TCP10Q12799 353 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 ZBTB17Q13105 803 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 SLC29A2Q14542 456 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 PREPLQ4J6C6 727 aaPredicted RBP18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 RINT1Q6NUQ1 792 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 PPP1R18Q6NYC8 613 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 RFX6Q8HWS3 928 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 EPB41L4AQ9HCS5 686 aaPredicted RBP18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 INTS13Q9NVM9 706 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 PDXKO00764 312 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 CCDC22O60826 627 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 CPP00450 1065 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 TMPRSS15P98073 1019 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 KRT17Q04695 432 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 NTRK3Q16288 839 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 PCGF5Q86SE9 256 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 PIP4K2CQ8TBX8 421 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 SCINQ9Y6U3 715 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 LRRC10BA6NIK2 292 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 SLC16A2P36021 539 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 PDIA6Q15084 440 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 LONRF1Q17RB8 773 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 BSPRYQ5W0U4 402 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 NAIF1Q69YI7 327 aaPredicted RBP18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 NUP85Q9BW27 656 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 CELF4Q9BZC1 486 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 COPEO14579 308 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 TTC16Q8NEE8 873 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 RBM41Q96IZ5 413 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 INTS2Q9H0H0 1204 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 GINM1Q9NU53 330 aa18.38■□□□□ 0.53
HMGXB3-201ENST00000502717 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 CERKLQ49MI3 558 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 KCTD1Q719H9 257 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 TTC1Q99614 292 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 PRKAG2Q9UGJ0 569 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 MYMKA6NI61 221 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 SNAP23O00161 211 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 MARK3P27448 753 aa18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 CTCFP49711 727 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-201ENST00000502717 CCNA1P78396 465 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms