RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TMEM60Q9H2L4 133 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 DHX33Q9H6R0 707 aaKnown RBP10.72□□□□□ -0.69
MSH5-218ENST00000494646 MINDY3Q9H8M7 445 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 TLR9Q9NR96 1032 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 CHST12Q9NRB3 414 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 PUF60Q9UHX1 559 aaKnown RBP10.72□□□□□ -0.69
MSH5-218ENST00000494646 ASAP2O43150 1006 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 NEMFO60524 1076 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 TBX10O75333 385 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 TECP42680 631 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 UBE3AQ05086 875 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 C8orf34Q49A92 452 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 MAEAQ7L5Y9 396 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 TMC7Q7Z402 723 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 EXOC8Q8IYI6 725 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 EFHBQ8N7U6 833 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 RNF149Q8NC42 400 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 PIGOQ8TEQ8 1089 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 PSPC1Q8WXF1 523 aaKnown RBP10.71□□□□□ -0.69
MSH5-218ENST00000494646 MRPS27Q92552 414 aaKnown RBP10.71□□□□□ -0.69
MSH5-218ENST00000494646 C8orf76Q96K31 380 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 ZNF558Q96NG5 402 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 MTMR9Q96QG7 549 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 KIF2CQ99661 725 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 MTRQ99707 1265 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 HSD17B14Q9BPX1 270 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 CLEC1BQ9P126 229 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 CD207Q9UJ71 328 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 BARX2Q9UMQ3 279 aaPredicted RBP10.71□□□□□ -0.69
MSH5-218ENST00000494646 INPP5FQ9Y2H2 1132 aa10.71□□□□□ -0.69
MSH5-218ENST00000494646 FAM86C2PA6NEL3 165 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 POTEMA6NI47 508 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 HIDE1A8MVS5 230 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 CA8P35219 290 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 RFC5P40937 340 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 BCAR1P56945 870 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 PLCB3Q01970 1234 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 KRT17Q04695 432 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 EMC2Q15006 297 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 CSPP1Q1MSJ5 1256 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 LLGL2Q6P1M3 1020 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 SRGAP1Q7Z6B7 1085 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 FERMT3Q86UX7 667 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 LRRC43Q8N309 656 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 FAM184AQ8NB25 1140 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 TCP11Q8WWU5 503 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 ZSCAN31Q96LW9 406 aaPredicted RBP10.7□□□□□ -0.7
MSH5-218ENST00000494646 TCF25Q9BQ70 676 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 LRFN3Q9BTN0 628 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 C1QTNF1Q9BXJ1 281 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 GBP3Q9H0R5 595 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 XPNPEP1Q9NQW7 623 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 ENTPD7Q9NQZ7 604 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 FAM105AQ9NUU6 356 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 SPG21Q9NZD8 308 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 FAM50BQ9Y247 325 aa10.7□□□□□ -0.7
MSH5-218ENST00000494646 MYO10Q9HD67 2058 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 PI4K2BG5E9Z4 385 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 FSCN2O14926 492 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 ZC3H11AO75152 810 aaKnown RBP eCLIP10.69□□□□□ -0.7
MSH5-218ENST00000494646 OFD1O75665 1012 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 GLP2RO95838 553 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 SKIP12755 728 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 HOXA11P31270 313 aaPredicted RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 ALDH7A1P49419 539 aaKnown RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 AFF1P51825 1210 aaKnown RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 RNASELQ05823 741 aaKnown RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 GNL2Q13823 731 aaKnown RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 SMAD2Q15796 467 aaKnown RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 DUSP6Q16828 381 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 SLC39A11Q8N1S5 342 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 PGBD4Q96DM1 585 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 CPB2Q96IY4 423 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 MSLNLQ96KJ4 702 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 CCDC43Q96MW1 224 aaKnown RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 LLPHQ9BRT6 129 aaKnown RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 APOL5Q9BWW9 433 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 NRDE2Q9H7Z3 1164 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 ANKEF1Q9NU02 776 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 AGPAT5Q9NUQ2 364 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 CIZ1Q9ULV3 898 aaPredicted RBP10.69□□□□□ -0.7
MSH5-218ENST00000494646 PPME1Q9Y570 386 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 PCDHB2Q9Y5E7 798 aa10.69□□□□□ -0.7
MSH5-218ENST00000494646 TDRD15B5MCY1 1934 aaKnown RBP10.68□□□□□ -0.7
MSH5-218ENST00000494646 INO80B-WBP1J3KQ70 363 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 ZNF623O75123 536 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 MED24O75448 989 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 DDHD2O94830 711 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 LYPLA2O95372 231 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 CXCL14O95715 111 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 GALTP07902 379 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 SPATA31C1P0DKV0 1188 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 ARL2P36404 184 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 RARRES1P49788 294 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 ZP2Q05996 745 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 SMAD4Q13485 552 aaKnown RBP10.68□□□□□ -0.7
MSH5-218ENST00000494646 NOMO2Q5JPE7 1267 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 TMEM31Q5JXX7 168 aa10.68□□□□□ -0.7
MSH5-218ENST00000494646 UBXN11Q5T124 520 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms