RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ADAM2Q99965 735 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 MSRAQ9UJ68 235 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 TRANK1O15050 2925 aa12.94□□□□□ -0.34
UBA3-211ENST00000493957 A0A087X0B3 334 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 NPHP3-ACAD11A0A0J9YXS1 232 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 SSBP05455 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBA3-211ENST00000493957 UBA7P41226 1012 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 SLC12A3P55017 1021 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
UBA3-211ENST00000493957 RAD51AP2Q09MP3 1159 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 MAPK7Q13164 816 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 ZNF697Q5TEC3 545 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 RINT1Q6NUQ1 792 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 EXOC8Q8IYI6 725 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 DAW1Q8N136 415 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 CRIPAKQ8N1N5 446 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 GUCD1Q96NT3 240 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 KIFC3Q9BVG8 833 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 FTHL17Q9BXU8 183 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 SEMA6BQ9H3T3 888 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 CERS4Q9HA82 394 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 BLOC1S4Q9NUP1 217 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 DNM3Q9UQ16 869 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
UBA3-211ENST00000493957 PRRC2BQ5JSZ5 2229 aaKnown RBP12.93□□□□□ -0.34
UBA3-211ENST00000493957 ADGRA3Q8IWK6 1321 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 DENND3A2RUS2 1198 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 EPOPA6NHQ4 379 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 C9IYK1 514 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 CITO14578 2027 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 SPTLC2O15270 562 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 ASAP2O43150 1006 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 HIP1RO75146 1068 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 EDN1P05305 212 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 PLA2G4BP0C869 781 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 DDIT3P35638 169 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 PTENP60484 403 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 TAP1Q03518 808 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 DHX8Q14562 1220 aaKnown RBP12.92□□□□□ -0.34
UBA3-211ENST00000493957 MCM6Q14566 821 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 GRIN2CQ14957 1233 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 PPP2R2DQ66LE6 453 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 C1orf186Q6ZWK4 172 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 CATSPER4Q7RTX7 472 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
UBA3-211ENST00000493957 MCPH1Q8NEM0 835 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 RAD9AQ99638 391 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 CCSER1Q9C0I3 900 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 ZNF576Q9H609 170 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 RC3H2Q9HBD1 1191 aaKnown RBP12.92□□□□□ -0.34
UBA3-211ENST00000493957 RGS18Q9NS28 235 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 MTMR10Q9NXD2 777 aa12.92□□□□□ -0.34
UBA3-211ENST00000493957 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
UBA3-211ENST00000493957 LRRIQ4A6NIV6 560 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 RFXAPO00287 272 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 B4GALT5O43286 388 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 YEATS4O95619 227 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 ATF7P17544 494 aaPredicted RBP12.91□□□□□ -0.34
UBA3-211ENST00000493957 SFPQP23246 707 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBA3-211ENST00000493957 PHKA2P46019 1235 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 SARSP49591 514 aaKnown RBP12.91□□□□□ -0.34
UBA3-211ENST00000493957 MBTD1Q05BQ5 628 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 MXD4Q14582 209 aaPredicted RBP12.91□□□□□ -0.34
UBA3-211ENST00000493957 AMHR2Q16671 573 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 NAALADL2Q58DX5 795 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 ARSHQ5FYA8 562 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 SRGAP1Q7Z6B7 1085 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
UBA3-211ENST00000493957 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 SYT2Q8N9I0 419 aaPredicted RBP12.91□□□□□ -0.34
UBA3-211ENST00000493957 CALML4Q96GE6 196 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 YME1L1Q96TA2 773 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 PANK2Q9BZ23 570 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 NT5C3AQ9H0P0 336 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 SLC28A3Q9HAS3 691 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 PIN4Q9Y237 131 aaKnown RBP12.91□□□□□ -0.34
UBA3-211ENST00000493957 USP20Q9Y2K6 914 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
UBA3-211ENST00000493957 REV3LO60673 3130 aa12.91□□□□□ -0.34
UBA3-211ENST00000493957 TMEM265A0A087WTH1 108 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 LINC01553A4QN01 128 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 SFI1A8K8P3 1242 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 INO80B-WBP1J3KQ70 363 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 TSPAN1O60635 241 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 PPP6R2O75170 966 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 DGKIO75912 1065 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 FGFR1P11362 822 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
UBA3-211ENST00000493957 HOXA11P31270 313 aaPredicted RBP12.9□□□□□ -0.34
UBA3-211ENST00000493957 CDC42EP1Q00587 391 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 TFDP1Q14186 410 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 LONRF3Q496Y0 759 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.34
UBA3-211ENST00000493957 ODR4Q5SWX8 454 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 UBXN11Q5T124 520 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 AXDND1Q5T1B0 1012 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms