RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 KIAA1683Q9H0B3 1180 aa5.18□□□□□ -1.58
CLK1-213ENST00000492793 CDH19Q9H159 772 aa5.18□□□□□ -1.58
CLK1-213ENST00000492793 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLK1-213ENST00000492793 SAP30BPQ9UHR5 308 aaKnown RBP5.18□□□□□ -1.58
CLK1-213ENST00000492793 SH3D21A4FU49 640 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 ABLIM3O94929 683 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 ZNF888P0CJ79 500 aaPredicted RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 GSPT1P15170 499 aaKnown RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 VCAM1P19320 739 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 MRE11P49959 708 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 SESN2P58004 480 aaPredicted RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 KRT85P78386 507 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 CD69Q07108 199 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 USP10Q14694 798 aaKnown RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 MLC1Q15049 377 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 PCOLCEQ15113 449 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 NOMO1Q15155 1222 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 CCDC178Q5BJE1 867 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 TMEM240Q5SV17 173 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 KRT40Q6A162 431 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 FAM180AQ6UWF9 173 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 RALYLQ86SE5 291 aaKnown RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 FAM124AQ86V42 546 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 CMTR2Q8IYT2 770 aaKnown RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 KLHL36Q8N4N3 616 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 LINC01356Q8N9X3 169 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 GLB1L3Q8NCI6 653 aaPredicted RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 GFM2Q969S9 779 aaKnown RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 YTHDC1Q96MU7 727 aaKnown RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 DMRT3Q9NQL9 472 aa5.17□□□□□ -1.58
CLK1-213ENST00000492793 RBM8AQ9Y5S9 174 aaKnown RBP5.17□□□□□ -1.58
CLK1-213ENST00000492793 A0A0A6YYK5 440 aaPredicted RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 AKR1B10O60218 316 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 MAFO75444 373 aaPredicted RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 ADSLP30566 484 aaPredicted RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 MALLQ13021 153 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 ADRM1Q16186 407 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 ANO4Q32M45 955 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 FAM26FQ5R3K3 315 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 IFIT1BQ5T764 474 aaKnown RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 BTNL9Q6UXG8 535 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 LARP4Q71RC2 724 aaKnown RBP eCLIP5.16□□□□□ -1.58
CLK1-213ENST00000492793 C14orf80Q86SX3 495 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 SLC41A1Q8IVJ1 513 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 REXO1L1PQ8IX06 675 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 BCL6BQ8N143 479 aaPredicted RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 THEMISQ8N1K5 641 aaPredicted RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 CLIP3Q96DZ5 547 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 FDXACB1Q9BRP7 624 aaPredicted RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 SOX7Q9BT81 388 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 ZNF277Q9NRM2 450 aaPredicted RBP5.16□□□□□ -1.58
CLK1-213ENST00000492793 NCDNQ9UBB6 729 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 TUBD1Q9UJT1 453 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 INTUQ9ULD6 942 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 PTPN22Q9Y2R2 807 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 ADAMTS20P59510 1910 aa5.16□□□□□ -1.58
CLK1-213ENST00000492793 GOLGA6CA6NDK9 693 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 GOLGA6BA6NDN3 693 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 MROH6A6NGR9 719 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 B4GALT4O60513 344 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 LY86O95711 162 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 GOLGA6DP0CG33 693 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 CSF2RBP32927 897 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 CYP2C19P33261 490 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 TXKP42681 527 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 KCNC1P48547 511 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 PER3P56645 1201 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 GJA9P57773 515 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 CAP1Q01518 475 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 ZMAT1Q5H9K5 638 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 ZNF761Q86XN6 746 aaPredicted RBP5.15□□□□□ -1.59
CLK1-213ENST00000492793 OR14K1Q8NGZ2 314 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 NRG4Q8WWG1 115 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 RIN2Q8WYP3 895 aaPredicted RBP5.15□□□□□ -1.59
CLK1-213ENST00000492793 DPF2Q92785 391 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 AJUBAQ96IF1 538 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 TOX2Q96NM4 488 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 UHRF1Q96T88 793 aaPredicted RBP5.15□□□□□ -1.59
CLK1-213ENST00000492793 OSBPL6Q9BZF3 934 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 GREM2Q9H772 168 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 GOLGA6AQ9NYA3 693 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 PNMA8BQ9ULN7 279 aaPredicted RBP5.15□□□□□ -1.59
CLK1-213ENST00000492793 VWA7Q9Y334 891 aa5.15□□□□□ -1.59
CLK1-213ENST00000492793 PRPF3O43395 683 aaKnown RBP5.14□□□□□ -1.59
CLK1-213ENST00000492793 DTNBO60941 627 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 RFPL1O75677 317 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 SEC24DO94855 1032 aaPredicted RBP5.14□□□□□ -1.59
CLK1-213ENST00000492793 ZRANB2O95218 330 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLK1-213ENST00000492793 C8AP07357 584 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 U2AF1L5P0DN76 240 aaPredicted RBP5.14□□□□□ -1.59
CLK1-213ENST00000492793 GAAP10253 952 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 SLURP1P55000 103 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 ADKP55263 362 aaKnown RBP5.14□□□□□ -1.59
CLK1-213ENST00000492793 U2AF1Q01081 240 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLK1-213ENST00000492793 KIAA2012Q0VF49 1180 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 ACAP1Q15027 740 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 FAM102BQ5T8I3 360 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 NT5DC1Q5TFE4 455 aa5.14□□□□□ -1.59
CLK1-213ENST00000492793 AGBL4Q5VU57 503 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms