RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CNOT4O95628 575 aaKnown RBP6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 PLATP00750 562 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 PDGFRBP09619 1106 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 OSMP13725 252 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 HOXA5P20719 270 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 EPHB4P54760 987 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 BPIFB4P59827 614 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 ATP2C1P98194 919 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 NFYCQ13952 458 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 NFIXQ14938 502 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 PTPN21Q16825 1174 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 ZFYVE27Q5T4F4 411 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 FAM180AQ6UWF9 173 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 CLEC14AQ86T13 490 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 GIMAP8Q8ND71 665 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 C1orf162Q8NEQ5 155 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 NEIL1Q96FI4 390 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 ORAI2Q96SN7 254 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 SOX7Q9BT81 388 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 SLC6A15Q9H2J7 730 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 SEC61A2Q9H9S3 476 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 OAZ3Q9UMX2 235 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 SPEF1Q9Y4P9 236 aa6.54□□□□□ -1.36
HMGB1P38-201ENST00000490557 KLHL33A6NCF5 533 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 GABRDO14764 452 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 PRAMEF4O60810 478 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 SEC24DO94855 1032 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 LY86O95711 162 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 CD69Q07108 199 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 MUM1Q2TAK8 710 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 ZBTB46Q86UZ6 589 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 LYSMD2Q8IV50 215 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 UNC5BQ8IZJ1 945 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 ANKRD53Q8N9V6 530 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 FUBP3Q96I24 572 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 FAXDC2Q96IV6 333 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 RPL10LQ96L21 214 aaKnown RBP6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 ASPSCR1Q9BZE9 553 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 PRDM12Q9H4Q4 367 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 NCDNQ9UBB6 729 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 RCAN3Q9UKA8 241 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 GPR45Q9Y5Y3 372 aa6.53□□□□□ -1.36
HMGB1P38-201ENST00000490557 C2orf78A6NCI8 922 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 SLC26A4O43511 780 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 ALDH1A2O94788 518 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 TOX4O94842 621 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 JUNP05412 331 aaKnown RBP6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 GAAP10253 952 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 CR2P20023 1033 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 CTSWP56202 376 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 TBR1Q16650 682 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 TBC1D10BQ4KMP7 808 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 MBNL2Q5VZF2 373 aaKnown RBP6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 TTLL10Q6ZVT0 673 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 CBARPQ8N350 705 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 SSH1Q8WYL5 1049 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 FATE1Q969F0 183 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 DPYSL5Q9BPU6 564 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 FDXACB1Q9BRP7 624 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 RTEL1Q9NZ71 1219 aa6.52□□□□□ -1.37
HMGB1P38-201ENST00000490557 A0A1W2PRX2 142 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 TRIM75PA6NK02 468 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 NRP1O14786 923 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 PRICKLE3O43900 615 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 SNUPNO95149 360 aaKnown RBP6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 KIR2DL3P43628 341 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 MEF2AQ02078 507 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 ANO4Q32M45 955 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 GAGE13Q4V321 117 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 MUM1L1Q5H9M0 696 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 KCNK18Q7Z418 384 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 TAX1BP1Q86VP1 789 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 CIR1Q86X95 450 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 SLC41A1Q8IVJ1 513 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 PPP1R14CQ8TAE6 165 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 RABGGTAQ92696 567 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 BDH2Q9BUT1 245 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 ADI1Q9BV57 179 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 MSL2Q9HCI7 577 aa6.51□□□□□ -1.37
HMGB1P38-201ENST00000490557 A0A0G2JLL6 359 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 LTA4HP09960 611 aaKnown RBP6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 RBP3P10745 1247 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 AGXTP21549 392 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 RPS19P39019 145 aaKnown RBP6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 MTNR1BP49286 362 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 ADCY7P51828 1080 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 HGFACQ04756 655 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 INAVAQ3KP66 663 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 EFCAB2Q5VUJ9 269 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 BTNL9Q6UXG8 535 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 PPM1NQ8N819 430 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 GLB1L3Q8NCI6 653 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 SHCBP1Q8NEM2 672 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 TSPEARQ8WU66 669 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 ARL8AQ96BM9 186 aa6.5□□□□□ -1.37
HMGB1P38-201ENST00000490557 AASDHPPTQ9NRN7 309 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms