RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 WARS2Q9UGM6 360 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 PIK3R4Q99570 1358 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 DYTNA2CJ06 578 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 GSAPA4D1B5 854 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 FTLP02792 175 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 NPEPPSP55786 919 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 SRP54P61011 504 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 ACSM2AQ08AH3 577 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TBX2Q13207 712 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 MXD4Q14582 209 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 SNX17Q15036 470 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ELF2Q15723 593 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TRIM68Q6AZZ1 485 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 PLEKHA7Q6IQ23 1121 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TMED8Q6PL24 325 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 ULK2Q8IYT8 1036 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 PTPRN2Q92932 1015 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 RBBP8Q99708 897 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TMEM60Q9H2L4 133 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 EPB41L5Q9HCM4 733 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 EMC3Q9P0I2 261 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 RPS6KB2Q9UBS0 482 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 A0A088AWK7 358 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 MAGEB6P1A0A0J9YX57 407 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 RGS10O43665 173 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ZNF10P21506 573 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 AXLP30530 894 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 NLRP11P59045 1033 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 CYP4A11Q02928 519 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 MAPRE1Q15691 268 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 CYP4A22Q5TCH4 519 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 LIN54Q6MZP7 749 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 CC2D1AQ6P1N0 951 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 CYFIP1Q7L576 1253 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ZNF467Q7Z7K2 595 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 CHERPQ8IWX8 916 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 RCOR2Q8IZ40 523 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 MMGT1Q8N4V1 131 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 IFT43Q96FT9 208 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 HINFPQ9BQA5 517 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 RUBCNLQ9H714 662 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 NEUROD4Q9HD90 331 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 STRIP2Q9ULQ0 834 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 FNDC3AQ9Y2H6 1198 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 TRIM64A6NGJ6 449 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PLEKHA8P1O95397 391 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 COPAP53621 1224 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PSMD4P55036 377 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 PTPAQ15257 358 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 SPATA1Q5VX52 437 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 UGT3A1Q6NUS8 523 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 POTEAQ6S8J7 498 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 DSCC1Q9BVC3 393 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PIDD1Q9HB75 910 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TRPC7Q9HCX4 862 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 DBF4Q9UBU7 674 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 KAT6AQ92794 2004 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TRIM38O00635 465 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 DDAH1O94760 285 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 CYP17A1P05093 508 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 DARSP14868 501 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 SERPINB8P50452 374 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 RPAINQ86UA6 219 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 IFNL1Q8IU54 200 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TNIP3Q96KP6 325 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PRAM1Q96QH2 718 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 FSD1LQ9BXM9 530 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 RETREG1Q9H6L5 497 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TMEM161AQ9NX61 479 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 LNPEPQ9UIQ6 1025 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 USP16Q9Y5T5 823 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 RTEL1-TNFRSF6BF6WH68 1400 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 SMIM23A6NLE4 172 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 P4HA2O15460 535 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 GATBO75879 557 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 RBP3P10745 1247 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 BEND3Q5T5X7 828 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 ANO1Q5XXA6 986 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 ENKURQ8TC29 256 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 NELFBQ8WX92 580 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PCDH18Q9HCL0 1135 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 HHATLQ9HCP6 504 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 CADPSQ9ULU8 1353 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 CAND2O75155 1236 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 IL6P05231 212 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 CD19P15391 556 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TNNI1P19237 187 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 LIG4P49917 911 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 IRX5P78411 483 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 UBE2R2Q712K3 238 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 DDX54Q8TDD1 881 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 APOL4Q9BPW4 351 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 CNPPD1Q9BV87 410 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 STK33Q9BYT3 514 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PAIP1Q9H074 479 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 BLMP54132 1417 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 PPIP5K1Q6PFW1 1433 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PIK3CGP48736 1102 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 USP14P54578 494 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 AP3S2P59780 193 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms