RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 NFKB1P19838 968 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 MUTP22033 750 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PDIA3P30101 505 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 MC4RP32245 332 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 GRK4P32298 578 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ALDH9A1P49189 494 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 USP11P51784 963 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 SLC5A3P53794 718 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 BPIFB3P59826 476 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 RNASE9P60153 205 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ARF3P61204 181 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ARF1P84077 181 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 KIF23Q02241 960 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 KCNC4Q03721 635 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF543Q08ER8 600 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 MAPK7Q13164 816 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PPP2R5CQ13362 524 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 NNTQ13423 1086 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CUL4AQ13619 759 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 IKBKEQ14164 716 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PDE3AQ14432 1141 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 POSTNQ15063 836 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 SF1Q15637 639 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PFKFB4Q16877 469 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 NBPF9Q3BBW0 867 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ADCK5Q3MIX3 580 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ARL13BQ3SXY8 428 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 EFHC2Q5JST6 749 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CEP135Q66GS9 1140 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 DCAF15Q66K64 600 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 SLC30A6Q6NXT4 461 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PLBD1Q6P4A8 553 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 GGT6Q6P531 493 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 TXNDC11Q6PKC3 985 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ABRAXAS1Q6UWZ7 409 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 MPRIPQ6WCQ1 1025 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 C16orf59Q7L2K0 433 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CATSPER4Q7RTX7 472 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 VN1R5Q7Z5H4 357 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 WAPLQ7Z5K2 1190 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 LRRTM4Q86VH4 590 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ANKLE1Q8NAG6 615 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC191Q8NCU4 936 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 TOR1AIP2Q8NFQ8 470 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 SSH3Q8TE77 659 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ASB12Q8WXK4 309 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF516Q92618 1163 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ERCC4Q92889 916 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CENPTQ96BT3 561 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ACSF2Q96CM8 615 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 TRIM44Q96DX7 344 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 MAELQ96JY0 434 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 NSUN5Q96P11 429 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CORO1BQ9BR76 489 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PYM1Q9BRP8 204 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 TSEN34Q9BSV6 310 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 LGR4Q9BXB1 951 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ZDHHC5Q9C0B5 715 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 WNT10AQ9GZT5 417 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 MKRN2Q9H000 416 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ADAM19Q9H013 955 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 SOX17Q9H6I2 414 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PRDM5Q9NQX1 630 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PLSCR4Q9NRQ2 329 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 GPR27Q9NS67 375 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 LRFN1Q9P244 771 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CGGBP1Q9UFW8 167 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF112Q9UJU3 913 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 RNF112Q9ULX5 631 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 COQ6Q9Y2Z9 468 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 PCDHGB2Q9Y5G2 931 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 COL16A1Q07092 1604 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 C10orf71Q711Q0 1435 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CFAP46Q8IYW2 2715 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ZMYM3Q14202 1370 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ERICH3Q5RHP9 1530 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SOS1Q07889 1333 aaPredicted RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 ADGBQ8N7X0 1667 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 A0A1W2PPH5 198 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 PRAMEF27A3QJZ7 478 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 POM121BA6NF01 834 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 PGPEP1LA6NFU8 196 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 APOL1O14791 398 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 WNT9AO14904 365 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 DAPK3O43293 454 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 TGM5O43548 720 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 NCK2O43639 380 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 PLA2G6O60733 806 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 COBLO75128 1261 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 TMEM63AO94886 807 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 UBOX5O94941 541 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 IL18RAPO95256 599 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 KRT1P04264 644 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 RPLP2P05387 115 aaKnown RBP3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SLFN14P0C7P3 912 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SRGAP2CP0DJJ0 459 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CKMT1AP12532 417 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 SCG2P13521 617 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 C5AR1P21730 350 aa3.24□□□□□ -1.89
HMGN4-202ENST00000477243 CHMP24386 653 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms