RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TSHZ2Q9NRE2 1034 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 DACT1Q9NYF0 836 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 ORC3Q9UBD5 711 aaPredicted RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 DNAJB4Q9UDY4 337 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 TMEM221A6NGB7 291 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 M0R296 226 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 WNT7AO00755 349 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 MARCH6O60337 910 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 FDPSP14324 419 aaKnown RBP13.06□□□□□ -0.32
VARS2-208ENST00000477052 SFPQP23246 707 aaKnown RBP eCLIP13.06□□□□□ -0.32
VARS2-208ENST00000477052 PPM1AP35813 382 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 ALDH7A1P49419 539 aaKnown RBP13.06□□□□□ -0.32
VARS2-208ENST00000477052 POLGP54098 1239 aaPredicted RBP13.06□□□□□ -0.32
VARS2-208ENST00000477052 ZXDAP98168 799 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 IER5LQ5T953 404 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
VARS2-208ENST00000477052 TRIM67Q6ZTA4 783 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 ZNF280BQ86YH2 543 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 VPS52Q8N1B4 723 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 MRPL43Q8N983 215 aaKnown RBP13.06□□□□□ -0.32
VARS2-208ENST00000477052 LXNQ9BS40 222 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 NRDE2Q9H7Z3 1164 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 NGRNQ9NPE2 291 aaKnown RBP13.06□□□□□ -0.32
VARS2-208ENST00000477052 FAM105AQ9NUU6 356 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 TBC1D13Q9NVG8 400 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 HCFC2Q9Y5Z7 792 aa13.06□□□□□ -0.32
VARS2-208ENST00000477052 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.05□□□□□ -0.32
VARS2-208ENST00000477052 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
VARS2-208ENST00000477052 OFD1O75665 1012 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 CDKL5O76039 1030 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
VARS2-208ENST00000477052 EPCAMP16422 314 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 SLC11A1P49279 550 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 RNASELQ05823 741 aaKnown RBP13.05□□□□□ -0.32
VARS2-208ENST00000477052 LAMTOR4Q0VGL1 99 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
VARS2-208ENST00000477052 NOMO2Q5JPE7 1267 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 RARS2Q5T160 578 aaKnown RBP13.05□□□□□ -0.32
VARS2-208ENST00000477052 PPP4R3AQ6IN85 833 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 TMEM184AQ6ZMB5 413 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 FAM43BQ6ZT52 329 aaPredicted RBP13.05□□□□□ -0.32
VARS2-208ENST00000477052 ZNF410Q86VK4 478 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 PBXIP1Q96AQ6 731 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 SMOC2Q9H3U7 446 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 CHST12Q9NRB3 414 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
VARS2-208ENST00000477052 JAK2O60674 1132 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 DDHD2O94830 711 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
VARS2-208ENST00000477052 GALTP07902 379 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 MYBP10242 640 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 HOXA11P31270 313 aaPredicted RBP13.04□□□□□ -0.32
VARS2-208ENST00000477052 YWHABP31946 246 aaKnown RBP13.04□□□□□ -0.32
VARS2-208ENST00000477052 NHLH1Q02575 133 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 SPIRE1Q08AE8 756 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 EMC2Q15006 297 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 EPHA7Q15375 998 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 ME3Q16798 604 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 XKR9Q5GH70 373 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 GLB1LQ6UWU2 654 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 AGMOQ6ZNB7 445 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 TPH2Q8IWU9 490 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 SLC7A3Q8WY07 619 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 IGSF21Q96ID5 467 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 CPB2Q96IY4 423 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 MRPL9Q9BYD2 267 aaKnown RBP13.04□□□□□ -0.32
VARS2-208ENST00000477052 ZBP1Q9H171 429 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 POMKQ9H5K3 350 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 DHX33Q9H6R0 707 aaKnown RBP13.04□□□□□ -0.32
VARS2-208ENST00000477052 AGPAT5Q9NUQ2 364 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 STK36Q9NRP7 1315 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
VARS2-208ENST00000477052 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
VARS2-208ENST00000477052 POMCP01189 267 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 SRGAP2BP0DMP2 458 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
VARS2-208ENST00000477052 XBP1P17861 261 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 KRT2P35908 639 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 CDC42EP1Q00587 391 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 PRSS33Q8NF86 280 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 PSPC1Q8WXF1 523 aaKnown RBP13.03□□□□□ -0.32
VARS2-208ENST00000477052 CASP10Q92851 521 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 MFSD14AQ96MC6 490 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 EIF2AQ9BY44 585 aaKnown RBP13.03□□□□□ -0.32
VARS2-208ENST00000477052 INO80BQ9C086 356 aaPredicted RBP13.03□□□□□ -0.32
VARS2-208ENST00000477052 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 XPNPEP1Q9NQW7 623 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 HES2Q9Y543 173 aa13.03□□□□□ -0.32
VARS2-208ENST00000477052 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
VARS2-208ENST00000477052 C2CD4DB7Z1M9 353 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms