RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 C2CD2Q9Y426 696 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 MYH1P12882 1939 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 E2F6O75461 281 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 KRT16P08779 473 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 WNT7AO00755 349 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 KRT8P05787 483 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 HIBADHP31937 336 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 EHHADHQ08426 723 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 PTK2BQ14289 1009 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CHRNA2Q15822 529 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 KCTD19Q17RG1 926 aaPredicted RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CYP4F22Q6NT55 531 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 PPP4R4Q6NUP7 873 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CNBD1Q8NA66 436 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CHURC1Q8WUH1 139 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 ADAM22Q9P0K1 906 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 H3BRJ5 948 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 MYBP10242 640 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 ACBD5Q5T8D3 534 aaPredicted RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 KAZNQ674X7 775 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 TRIM59Q8IWR1 403 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 ATL2Q8NHH9 583 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 IGDCC4Q8TDY8 1250 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 EEF2KMTQ96G04 330 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 ZBTB18Q99592 522 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 SYT15Q9BQS2 421 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 ISCUQ9H1K1 167 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 ASAP2O43150 1006 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 BUB1O43683 1085 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 UBOX5O94941 541 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 MCF2P10911 925 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 FLT3P36888 993 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 NCAPG2Q86XI2 1143 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 DDX42Q86XP3 938 aaKnown RBP eCLIP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 SRRM1Q8IYB3 904 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CCDC127Q96BQ5 260 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 DDX28Q9NUL7 540 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 WDR35Q9P2L0 1181 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CCDC159P0C7I6 412 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 MRPS15P82914 257 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 THOC5Q13769 683 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 C16orf87Q6PH81 154 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 TRIM67Q6ZTA4 783 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 KIF2BQ8N4N8 673 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 LPIN2Q92539 896 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 CNOT10Q9H9A5 744 aaKnown RBP12.28□□□□□ -0.44
U2AF1-209ENST00000475639 GGT7Q9UJ14 662 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
U2AF1-209ENST00000475639 EYA2O00167 538 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 ACTN1P12814 892 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 IFRD2Q12894 506 aaPredicted RBP12.27□□□□□ -0.44
U2AF1-209ENST00000475639 EARS2Q5JPH6 523 aaKnown RBP12.27□□□□□ -0.44
U2AF1-209ENST00000475639 TTBK2Q6IQ55 1244 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 ATG9AQ7Z3C6 839 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 TRAIPQ9BWF2 469 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 UBN1Q9NPG3 1134 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 TFCP2L1Q9NZI6 479 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 FBXL5Q9UKA1 691 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 JAG2Q9Y219 1238 aa12.27□□□□□ -0.44
U2AF1-209ENST00000475639 WBP4O75554 376 aaKnown RBP12.27□□□□□ -0.45
U2AF1-209ENST00000475639 NPTXRO95502 500 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.45
U2AF1-209ENST00000475639 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 PATL1Q86TB9 770 aaKnown RBP12.27□□□□□ -0.45
U2AF1-209ENST00000475639 GPBP1Q86WP2 473 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 RETREG2Q8NC44 543 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 PALMDQ9NP74 551 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 STMN3Q9NZ72 180 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 RAPGEF3O95398 923 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 IFNAR1P17181 557 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 NFKBIAP25963 317 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 ADAM9Q13443 819 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 DDB1Q16531 1140 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 CCNYQ8ND76 341 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 TRIM15Q9C019 465 aa12.27□□□□□ -0.45
U2AF1-209ENST00000475639 SGK1O00141 431 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 GPAA1O43292 621 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 LCA5LO95447 670 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 KCNA4P22459 653 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 POLR2FP61218 127 aaKnown RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 CMTR1Q8N1G2 835 aaKnown RBP12.26□□□□□ -0.45
U2AF1-209ENST00000475639 METTL13Q8N6R0 699 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 CENPTQ96BT3 561 aa12.26□□□□□ -0.45
U2AF1-209ENST00000475639 TRIM11Q96F44 468 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms