RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 RUBCNQ92622 972 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 ACSF2Q96CM8 615 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-214ENST00000473177 WRNIP1Q96S55 665 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 VIPAS39Q9H9C1 493 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 SSU72Q9NP77 194 aaKnown RBP5.48□□□□□ -1.53
LRCH3-214ENST00000473177 GPR108Q9NPR9 543 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 PAK6Q9NQU5 681 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-214ENST00000473177 TRMT1Q9NXH9 659 aaKnown RBP5.48□□□□□ -1.53
LRCH3-214ENST00000473177 IFNKQ9P0W0 207 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 TJP2Q9UDY2 1190 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 PRKAG2Q9UGJ0 569 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 NRBP1Q9UHY1 535 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 NAP1L2Q9ULW6 460 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-214ENST00000473177 PPT2Q9UMR5 302 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 RAXQ9Y2V3 346 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 PCDHAC2Q9Y5I4 1007 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 FHOD1Q9Y613 1164 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 BRCA2P51587 3418 aa5.48□□□□□ -1.53
LRCH3-214ENST00000473177 ZSWIM8A7E2V4 1837 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 TCP10L2B9ZVM9 353 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PDE8AO60658 829 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 CUTAO60888 179 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 LRIG2O94898 1065 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 BMP15O95972 392 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 H2AFB1P0C5Y9 115 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 H2AFB2P0C5Z0 115 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 MAGEA9P43362 315 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 EVCP57679 992 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 GNG11P61952 73 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PPIL2Q13356 520 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 TOB2Q14106 344 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 NKG7Q16617 165 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 IMMTQ16891 758 aaKnown RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 WHAMMP3Q1A5X7 153 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 ERCC6LQ2NKX8 1250 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 ADCK5Q3MIX3 580 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 SLC6A19Q695T7 634 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 SPECC1LQ69YQ0 1117 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 KRBA2Q6ZNG9 492 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 CCDC91Q7Z6B0 441 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 SLFN12Q8IYM2 578 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 ZBTB38Q8NAP3 1195 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 CCDC191Q8NCU4 936 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 FAM71BQ8TC56 605 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 SREK1Q8WXA9 508 aaKnown RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 COA7Q96BR5 231 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 HOOK2Q96ED9 719 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PGBD1Q96JS3 809 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 C8orf76Q96K31 380 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 TMEM87BQ96K49 555 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PRMT6Q96LA8 375 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PSMG3-AS1Q96PY0 264 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PANX2Q96RD6 677 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 FERD3LQ96RJ6 166 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 UHRF1Q96T88 793 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 BAG1Q99933 345 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.47□□□□□ -1.537e-7■■□□□ 13.4
LRCH3-214ENST00000473177 ISCA1Q9BUE6 129 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 XPO4Q9C0E2 1151 aaKnown RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 SEMA6BQ9H3T3 888 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 PHAXQ9H814 394 aaKnown RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 ZNHIT6Q9NWK9 470 aaKnown RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 GEMIN8Q9NWZ8 242 aaKnown RBP5.47□□□□□ -1.53
LRCH3-214ENST00000473177 GMIPQ9P107 970 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 STOML1Q9UBI4 398 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 LEMD3Q9Y2U8 911 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 TAF1P21675 1872 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 LAMB1P07942 1786 aa5.47□□□□□ -1.53
LRCH3-214ENST00000473177 A0A0C4DFX4 3053 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 CTAGE9A4FU28 777 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 ERICH4A6NGS2 130 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 SLC22A31A6NKX4 558 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 DYNC1LI2O43237 492 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 DNAJA2O60884 412 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 TADA3O75528 432 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 CLSTN1O94985 981 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 ZNF202O95125 648 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 MAP4K4O95819 1239 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 CST3P01034 146 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 HMGCRP04035 888 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 XBP1P17861 261 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 HOXA7P31268 230 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 IGHMBP2P38935 993 aaKnown RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 SYKP43405 635 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 GIPRP48546 466 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 GTF2A1P52655 376 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 YARSP54577 528 aaKnown RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 CKAP4Q07065 602 aaKnown RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 SPAG1Q07617 926 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 PPP2R5BQ15173 497 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 CCDC144BQ3MJ40 725 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 TTC31Q49AM3 519 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 DNAJC21Q5F1R6 531 aaKnown RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 ANO1Q5XXA6 986 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 E4F1Q66K89 784 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 CC2D1AQ6P1N0 951 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-214ENST00000473177 GBP6Q6ZN66 633 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 MICALCLQ6ZW33 695 aa5.46□□□□□ -1.54
LRCH3-214ENST00000473177 ARMCX6Q7L4S7 300 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms