RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 FKBP1AP62942 108 aaKnown RBP14.8□□□□□ -0.04
BRAT1-203ENST00000467558 C10orf67Q8IYJ2 551 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 RNF149Q8NC42 400 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 KCTD6Q8NC69 237 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 OSBPL9Q96SU4 736 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 FMO2Q99518 471 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 AGPAT5Q9NUQ2 364 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 LCMT1Q9UIC8 334 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 UBE4BO95155 1302 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 SLC12A2P55011 1212 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 SLC7A5Q01650 507 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 RNASELQ05823 741 aaKnown RBP14.8□□□□□ -0.04
BRAT1-203ENST00000467558 KCTD16Q68DU8 428 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 APOBEC3HQ6NTF7 200 aaKnown RBP14.8□□□□□ -0.04
BRAT1-203ENST00000467558 SAMD3Q8N6K7 520 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 BCAS4Q8TDM0 211 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 STRIP2Q9ULQ0 834 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 DLG5Q8TDM6 1919 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 PODXLO00592 558 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 UCHL3P15374 230 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 FMO5P49326 533 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 SLC18A3Q16572 532 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 SIX6OS1Q8N1H7 587 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 TTC39CQ8N584 583 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 TAB3Q8N5C8 712 aaPredicted RBP14.8□□□□□ -0.04
BRAT1-203ENST00000467558 STK33Q9BYT3 514 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 VPS33BQ9H267 617 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 MED1Q15648 1581 aaPredicted RBP14.8□□□□□ -0.04
BRAT1-203ENST00000467558 CYP11B2P19099 503 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 MXD4Q14582 209 aaPredicted RBP14.79□□□□□ -0.04
BRAT1-203ENST00000467558 ALS2CLQ60I27 953 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 TRIM72Q6ZMU5 477 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 RFFLQ8WZ73 363 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 NCAPGQ9BPX3 1015 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 GYPCP04921 128 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 GTF3C2Q8WUA4 911 aaPredicted RBP14.79□□□□□ -0.04
BRAT1-203ENST00000467558 GPRASP2Q96D09 838 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 TAAR1Q96RJ0 339 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 C11orf70Q9BRQ4 267 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 SMARCAD1Q9H4L7 1026 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 DDX4Q9NQI0 724 aaKnown RBP14.79□□□□□ -0.04
BRAT1-203ENST00000467558 APEX2Q9UBZ4 518 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 GAKO14976 1311 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 LPXNO60711 386 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 PTF1AQ7RTS3 328 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 ERGIC2Q96RQ1 377 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 WDR24Q96S15 920 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 SEPT10Q9P0V9 454 aa14.79□□□□□ -0.04
BRAT1-203ENST00000467558 MUTP22033 750 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 PPM1FP49593 454 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 BACE1P56817 501 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 SNRPFP62306 86 aaKnown RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 DYNLT1P63172 113 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 GEN1Q17RS7 908 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 NBPF9Q3BBW0 867 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 TWF2Q6IBS0 349 aaKnown RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 BEST2Q8NFU1 509 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 MRIQ9BWK5 157 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 GCOM2Q9BZD3 368 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 LRRC4BQ9NT99 713 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 MAD1L1Q9Y6D9 718 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 GRIN3BO60391 1043 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 PSMA2P25787 234 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 YWHAGP61981 247 aaKnown RBP eCLIP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 MAP7D1Q3KQU3 841 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 ZNF746Q6NUN9 644 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 DSTYKQ6XUX3 929 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 MORC4Q8TE76 937 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 RBM41Q96IZ5 413 aaKnown RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 GNA15P30679 374 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 PRKCEQ02156 737 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 ZC2HC1CQ53FD0 456 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 ZNF564Q8TBZ8 553 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 CDKL2Q92772 493 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 ZKSCAN4Q969J2 545 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 MRFAP1Q9Y605 127 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 A0A1W2PQJ5 194 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 TM4SF1P30408 202 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 KYAT1Q16773 422 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 GKAP1Q5VSY0 366 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 ANKRD20A3Q5VUR7 823 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 NFRKBQ6P4R8 1299 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 CACNA2D3Q8IZS8 1091 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 TMEM143Q96AN5 459 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
BRAT1-203ENST00000467558 LRFN2Q9ULH4 789 aa14.78□□□□□ -0.04
BRAT1-203ENST00000467558 AKAP12Q02952 1782 aa14.77□□□□□ -0.04
BRAT1-203ENST00000467558 TJP3O95049 919 aa14.77□□□□□ -0.04
BRAT1-203ENST00000467558 PRKCBP05771 671 aa14.77□□□□□ -0.04
BRAT1-203ENST00000467558 PNMA6AP0CW24 399 aaPredicted RBP14.77□□□□□ -0.04
BRAT1-203ENST00000467558 SNRNP35Q16560 246 aaKnown RBP14.77□□□□□ -0.04
BRAT1-203ENST00000467558 PASD1Q8IV76 773 aa14.77□□□□□ -0.04
BRAT1-203ENST00000467558 ZNF668Q96K58 619 aaPredicted RBP14.77□□□□□ -0.04
BRAT1-203ENST00000467558 NFU1Q9UMS0 254 aa14.77□□□□□ -0.04
BRAT1-203ENST00000467558 BAZ2BQ9UIF8 2168 aaKnown RBP14.77□□□□□ -0.04
BRAT1-203ENST00000467558 TROVE2P10155 538 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRAT1-203ENST00000467558 CIITAP33076 1130 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 RFC5P40937 340 aa14.77□□□□□ -0.05
BRAT1-203ENST00000467558 PLA2G4FQ68DD2 849 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms