RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 RGL1Q9NZL6 768 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 BAIAP2L1Q9UHR4 511 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 BTAF1O14981 1849 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 ANKRD62A6NC57 917 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 MSH4O15457 936 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 EYA4O95677 639 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 TRIM49P0CI25 452 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 TRIM49CP0CI26 452 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 FGFR4P22455 802 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 IFNAR2P48551 515 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 PSEN1P49768 467 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 ACCSLQ4AC99 568 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 C6orf118Q5T5N4 469 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 RINT1Q6NUQ1 792 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 CCDC63Q8NA47 563 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 TBC1D22AQ8WUA7 517 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 TMEM109Q9BVC6 243 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 ABCF3Q9NUQ8 709 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 SEPT11Q9NVA2 429 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 RABGAP1Q9Y3P9 1069 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 GREB1LQ9C091 1923 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-205ENST00000466780 ANKRD63C9JTQ0 380 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 C6orf229H3BNL8 230 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 RAD21O60216 631 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 SNAP25P60880 206 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 ADCY2Q08462 1091 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 CTTNQ14247 550 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 ARHGAP44Q17R89 818 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 SHROOM1Q2M3G4 852 aaPredicted RBP14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 FAM133BQ5BKY9 247 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 TRPM8Q7Z2W7 1104 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 CYP2W1Q8TAV3 490 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 SLC20A1Q8WUM9 679 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 MIEF2Q96C03 454 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 TBC1D31Q96DN5 1066 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 EIF2AK1Q9BQI3 630 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 PCYOX1Q9UHG3 505 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 RASAL2Q9UJF2 1139 aa14.02□□□□□ -0.16
PDZRN3-205ENST00000466780 AFF2P51816 1311 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 RIPK2O43353 540 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 KIF1CO43896 1103 aaKnown RBP14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 VIMP08670 466 aaKnown RBP14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 ALAS1P13196 640 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 TAL1P17542 331 aaPredicted RBP14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 CTNNA2P26232 953 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 CHRNA3P32297 505 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 GTF2IP78347 998 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 KIF22Q14807 665 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 CNGA2Q16280 664 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 PHLDB3Q6NSJ2 640 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 SLC30A10Q6XR72 485 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 PIGOQ8TEQ8 1089 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 TCP11Q8WWU5 503 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 SAMD15Q9P1V8 674 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 APEX2Q9UBZ4 518 aa14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 DBR1Q9UK59 544 aaKnown RBP14.02□□□□□ -0.17
PDZRN3-205ENST00000466780 FOXN3O00409 490 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 EIF3DO15371 548 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 LRRN2O75325 713 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 NFIL3Q16649 462 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 CCDC38Q502W7 563 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 TBC1D1Q86TI0 1168 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 FAM20AQ96MK3 541 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 FIZ1Q96SL8 496 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 TCRBV7S2A1N4TA0A589 114 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 GAP43P17677 238 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 HADHBP55084 474 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 BTNL9Q6UXG8 535 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 MYCT1Q8N699 235 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 TBC1D16Q8TBP0 767 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 AGPAT1Q99943 283 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 ZSWIM1Q9BR11 485 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 MKNK1Q9BUB5 465 aa14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 CHORDC1Q9UHD1 332 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-205ENST00000466780 TMEM110-MUSTN1A8MSY1 372 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 ZBTB39O15060 712 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 PPP1R12BO60237 982 aaPredicted RBP14□□□□□ -0.17
PDZRN3-205ENST00000466780 OAS1P00973 400 aaKnown RBP14□□□□□ -0.17
PDZRN3-205ENST00000466780 CLTAP09496 248 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 SREBF1P36956 1147 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 PEX5P50542 639 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 CYP2J2P51589 502 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 CLUL1Q15846 466 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 SLC15A2Q16348 729 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 C11orf63Q6NUN7 778 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
PDZRN3-205ENST00000466780 STAMBPL1Q96FJ0 436 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 USP40Q9NVE5 1235 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 DMAC2Q9NW81 257 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms