RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TCP11Q8WWU5 503 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 CENPTQ96BT3 561 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 USP40Q9NVE5 1235 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 VAV3Q9UKW4 847 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 AGAP1Q9UPQ3 857 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 ALG6Q9Y672 507 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 GOLGA6L10A0A0M3HER8 536 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 C21orf2O43822 256 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PPP1R12BO60237 982 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 GHRP10912 638 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 LRRC14Q15048 493 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PRR5LQ6MZQ0 368 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PHLDB3Q6NSJ2 640 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PIGWQ7Z7B1 504 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 MYCT1Q8N699 235 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 ERMNQ8TAM6 284 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 EIF2AK1Q9BQI3 630 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 INTS2Q9H0H0 1204 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 NOD2Q9HC29 1040 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 SIPA1L1O43166 1804 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 GTPBP10A4D1E9 387 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 FOXN3O00409 490 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 CHMP2AO43633 222 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 CREB1P16220 341 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 TNFAIP3P21580 790 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 PGM2Q96G03 612 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 NAP1L4Q99733 375 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 SLC12A4Q9UP95 1085 aa12.68□□□□□ -0.38
PDZRN3-203ENST00000462146 RBBP6Q7Z6E9 1792 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 ATP2B4P23634 1241 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 KCNJ1P48048 391 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 CACNB3P54284 484 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 SLF2Q8IX21 1173 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 MGARPQ8TDB4 240 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 BTBD6Q96KE9 485 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 MLXIPLQ9NP71 852 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 RGL2O15211 777 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 PHF2O75151 1096 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 CLTAP09496 248 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 PCDHA3Q9Y5H8 950 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 PCDHAC2Q9Y5I4 1007 aa12.67□□□□□ -0.38
PDZRN3-203ENST00000462146 FAM187AA6NFU0 413 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 CCDC169A6NNP5 214 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 FAM13AO94988 1023 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 DLG4P78352 724 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 DHX34Q14147 1143 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 Q4G0T1 1027 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 PNMA8AQ86V59 439 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 TPH2Q8IWU9 490 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 STAMBPL1Q96FJ0 436 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 DDX23Q9BUQ8 820 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 CTTNBP2NLQ9P2B4 639 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 APEX2Q9UBZ4 518 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 L3MBTL1Q9Y468 752 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 ANKRD62A6NC57 917 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 ASAP2O43150 1006 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 EYA4O95677 639 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 KCNJ2P63252 427 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 CCDC137Q6PK04 289 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 ANKS4BQ8N8V4 417 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 FIZ1Q96SL8 496 aa12.66□□□□□ -0.38
PDZRN3-203ENST00000462146 TISP43B9A030 160 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 RIPK2O43353 540 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 MYL7Q01449 175 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 AUHQ13825 339 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 MESDQ14696 234 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 TRPM8Q7Z2W7 1104 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 ARHGEF19Q8IW93 802 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 P3H4Q92791 437 aa12.65□□□□□ -0.38
PDZRN3-203ENST00000462146 HOOK2Q96ED9 719 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms