RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 TFDP1Q14186 410 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 KARSQ15046 597 aaKnown RBP11.19□□□□□ -0.62
RFX3-210ENST00000457373 ZNF697Q5TEC3 545 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 USP49Q70CQ1 688 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 LINC00301Q8NCQ3 95 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 MCPH1Q8NEM0 835 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 TOP1MTQ969P6 601 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 ADAM2Q99965 735 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 NT5C3AQ9H0P0 336 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 PCDHA11Q9Y5I1 949 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 TRIOBPQ9H2D6 2365 aa11.19□□□□□ -0.62
RFX3-210ENST00000457373 SPTLC2O15270 562 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 GJB5O95377 273 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 SLC34A2O95436 690 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 GLRA2P23416 452 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
RFX3-210ENST00000457373 CAPSQ13938 189 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 DHX8Q14562 1220 aaKnown RBP11.18□□□□□ -0.62
RFX3-210ENST00000457373 MXD4Q14582 209 aaPredicted RBP11.18□□□□□ -0.62
RFX3-210ENST00000457373 HYIQ5T013 277 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 CATSPER4Q7RTX7 472 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 SRGAP1Q7Z6B7 1085 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 DEFB123Q8N688 67 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 SLC28A3Q9HAS3 691 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 IFT122Q9HBG6 1241 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 RGS18Q9NS28 235 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 DNAH12Q6ZR08 3092 aa11.18□□□□□ -0.62
RFX3-210ENST00000457373 MYH11P35749 1972 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 TCHHQ07283 1943 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 LRRIQ4A6NIV6 560 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 MAP3K7O43318 606 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 SLC26A4O43511 780 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 PPP6R2O75170 966 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 YEATS4O95619 227 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 CA3P07451 260 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 PLA2G4BP0C869 781 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 NCLP19338 710 aaKnown RBP11.17□□□□□ -0.62
RFX3-210ENST00000457373 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.622e-6■■■□□ 15.1
RFX3-210ENST00000457373 PHKA2P46019 1235 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 RAD51AP2Q09MP3 1159 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 DSC3Q14574 896 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 RINT1Q6NUQ1 792 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
RFX3-210ENST00000457373 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
RFX3-210ENST00000457373 CHAMP1Q96JM3 812 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 RAD9AQ99638 391 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 RUSC1Q9BVN2 902 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 CCSER1Q9C0I3 900 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 TTYH1Q9H313 450 aaPredicted RBP11.17□□□□□ -0.62
RFX3-210ENST00000457373 SEMA6BQ9H3T3 888 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 ZNF576Q9H609 170 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 MINDY3Q9H8M7 445 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 CERS4Q9HA82 394 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 C1orf112Q9NSG2 853 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 CFAP45Q9UL16 551 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 TTC3P53804 2025 aa11.17□□□□□ -0.62
RFX3-210ENST00000457373 LCHNA4D1U4 455 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 INO80B-WBP1J3KQ70 363 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 HIP1RO75146 1068 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 STAG3L1P0CL83 205 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 LIG1P18858 919 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 PLCG1P19174 1290 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 TXLNAP40222 546 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 SARSP49591 514 aaKnown RBP11.16□□□□□ -0.62
RFX3-210ENST00000457373 PTENP60484 403 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 TSR1Q2NL82 804 aaKnown RBP11.16□□□□□ -0.62
RFX3-210ENST00000457373 PPP2R2DQ66LE6 453 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 ATL3Q6DD88 541 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 C1orf186Q6ZWK4 172 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 SLC24A5Q71RS6 500 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 LRRC15Q8TF66 581 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 BSNDQ8WZ55 320 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 RAD54LQ92698 747 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 IFT74Q96LB3 600 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 YME1L1Q96TA2 773 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 BLOC1S4Q9NUP1 217 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 PIN4Q9Y237 131 aaKnown RBP11.16□□□□□ -0.62
RFX3-210ENST00000457373 INSL6Q9Y581 213 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 PCDHB7Q9Y5E2 793 aa11.16□□□□□ -0.62
RFX3-210ENST00000457373 MORC2Q9Y6X9 1032 aaPredicted RBP11.16□□□□□ -0.62
RFX3-210ENST00000457373 TMEM265A0A087WTH1 108 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 NPHP3-ACAD11A0A0J9YXS1 232 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 SFI1A8K8P3 1242 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 C9IYK1 514 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 CUTAO60888 179 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 ERLIN2O94905 339 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 ARHGEF15O94989 841 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 GATMP50440 423 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 SLC12A3P55017 1021 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 PEX3P56589 373 aa11.15□□□□□ -0.62
RFX3-210ENST00000457373 HTRA4P83105 476 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms