RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SGCGQ13326 291 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 SP140Q13342 867 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 TAF5Q15542 800 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ANKDD1AQ495B1 522 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 LRSAM1Q6UWE0 723 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 NUP54Q7Z3B4 507 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 GALNTL5Q7Z4T8 443 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 GAS2L3Q86XJ1 694 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 TBC1D10CQ8IV04 446 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ZNF619Q8N2I2 560 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ADAMTS18Q8TE60 1221 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ANKS1AQ92625 1134 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 BRF1Q92994 677 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 KIAA1191Q96A73 305 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 NSUN4Q96CB9 384 aaKnown RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 DDX18Q9NVP1 670 aaKnown RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 F8VZ95 297 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 H0YHG0 523 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 MTRF1O75570 445 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 CDKL5O76039 1030 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 EPN2O95208 641 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 HIBADHP31937 336 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 STAT1P42224 750 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 IREB2P48200 963 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 C21orf58P58505 322 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 FKBP1AP62942 108 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 KRT85P78386 507 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 SARNPP82979 210 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 MUM1L1Q5H9M0 696 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 SYDE2Q5VT97 1194 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 CXorf57Q6NSI4 855 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 GALNT12Q8IXK2 581 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 PNMA1Q8ND90 353 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 TNIP2Q8NFZ5 429 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 SPATA18Q8TC71 538 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 ASB12Q8WXK4 309 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 CNDP2Q96KP4 475 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 TBCBQ99426 244 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 NKIRAS2Q9NYR9 191 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 ITGB1BP2Q9UKP3 347 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 COL2A1P02458 1487 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 BRCA1P38398 1863 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 KRBA1A5PL33 1030 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 RCCD1A6NED2 376 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 KIF2AO00139 706 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 EIF3FO00303 357 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 EIF1AYO14602 144 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 ZBTB43O43298 467 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 SERPINB2P05120 415 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 ABCB4P21439 1286 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 YBEYP58557 167 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 AP2B1P63010 937 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 TRDNQ13061 729 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 ZSCAN23Q3MJ62 389 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 RALYLQ86SE5 291 aaKnown RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 CCDC170Q8IYT3 715 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 LY9Q9HBG7 655 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 MCM9Q9NXL9 1143 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 ZNF624Q9P2J8 865 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-208ENST00000453705 SH3BGRL2Q9UJC5 107 aa8.52□□□□□ -1.05
BRCC3-208ENST00000453705 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 PTPDC1A2A3K4 754 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 IDH1O75874 414 aaKnown RBP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 SNX4O95219 450 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 HSPA1AP0DMV8 641 aaKnown RBP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 HSPA1BP0DMV9 641 aaKnown RBP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 INPP5BP32019 993 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 ADD1P35611 737 aaKnown RBP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 GJA5P36382 358 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 PRSS12P56730 875 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 NLRP5P59047 1200 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 GSTO1P78417 241 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 ZSCAN26Q16670 478 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 CCDC183Q5T5S1 534 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 BRAPQ7Z569 592 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 SLC9B2Q86UD5 537 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 SP8Q8IXZ3 490 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 NECAB1Q8N987 351 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 FAM184AQ8NB25 1140 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 ZNF384Q8TF68 577 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 ZNF296Q8WUU4 475 aaPredicted RBP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 HDAC2Q92769 488 aaKnown RBP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 PDLIM2Q96JY6 352 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 WDR24Q96S15 920 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 M0QX08 132 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 SIPA1L1O43166 1804 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 HOXC11O43248 304 aaPredicted RBP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 MYBL2P10244 700 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 LRRC74AQ0VAA2 488 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 LAPTM5Q13571 262 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 PCBP2Q15366 365 aaKnown RBP eCLIP8.51□□□□□ -1.05
BRCC3-208ENST00000453705 CCDC178Q5BJE1 867 aa8.51□□□□□ -1.05
BRCC3-208ENST00000453705 ZNF362Q5T0B9 420 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms