RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 C2orf69Q8N8R5 385 aa5.49□□□□□ -1.53
VPS29-202ENST00000447578 CCDC136Q96JN2 1154 aa5.49□□□□□ -1.53
VPS29-202ENST00000447578 MPHOSPH9Q99550 1183 aa5.49□□□□□ -1.53
VPS29-202ENST00000447578 INTS7Q9NVH2 962 aaKnown RBP5.49□□□□□ -1.53
VPS29-202ENST00000447578 VWA7Q9Y334 891 aa5.49□□□□□ -1.53
VPS29-202ENST00000447578 DMRT1Q9Y5R6 373 aa5.49□□□□□ -1.53
VPS29-202ENST00000447578 WASHC2CQ9Y4E1 1318 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 CCDC88BA6NC98 1476 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 HIP1RO75146 1068 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 KRT37O76014 449 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 GUCY2FP51841 1108 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 BPIFB4P59827 614 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 ADAM8P78325 824 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 TMEM177Q53S58 311 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 TRIM61Q5EBN2 209 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 DNAJC10Q8IXB1 793 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 ANKRD53Q8N9V6 530 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
VPS29-202ENST00000447578 SLC6A15Q9H2J7 730 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 SLC52A1Q9NWF4 448 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 GPRC5BQ9NZH0 403 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 SAE1Q9UBE0 346 aaPredicted RBP5.48□□□□□ -1.53
VPS29-202ENST00000447578 SFMBT1Q9UHJ3 866 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 DENND2AQ9ULE3 1009 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 THRAP3Q9Y2W1 955 aaKnown RBP5.48□□□□□ -1.53
VPS29-202ENST00000447578 EID1Q9Y6B2 187 aa5.48□□□□□ -1.53
VPS29-202ENST00000447578 EIF4G1Q04637 1599 aaKnown RBP5.47□□□□□ -1.53
VPS29-202ENST00000447578 UBE2QL1A1L167 161 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 H2AFYO75367 372 aaKnown RBP5.47□□□□□ -1.53
VPS29-202ENST00000447578 MAFO75444 373 aaPredicted RBP5.47□□□□□ -1.53
VPS29-202ENST00000447578 MAP4K4O95819 1239 aaPredicted RBP5.47□□□□□ -1.53
VPS29-202ENST00000447578 NEK4P51957 841 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 SLC6A3Q01959 620 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 CNGB1Q14028 1251 aaPredicted RBP5.47□□□□□ -1.53
VPS29-202ENST00000447578 ANKRD35Q8N283 1001 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 PPM1KQ8N3J5 372 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 AFAP1L2Q8N4X5 818 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 GCDHQ92947 438 aaPredicted RBP5.47□□□□□ -1.53
VPS29-202ENST00000447578 MIEF2Q96C03 454 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 ZG16BQ96DA0 208 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 FOXB1Q99853 325 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 TTPALQ9BTX7 342 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 UNC13AQ9UPW8 1703 aa5.47□□□□□ -1.53
VPS29-202ENST00000447578 SMARCA2P51531 1590 aa5.46□□□□□ -1.53
VPS29-202ENST00000447578 BICRAQ9NZM4 1560 aa5.46□□□□□ -1.53
VPS29-202ENST00000447578 GOLGA8BA8MQT2 603 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 DVL2O14641 736 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 FAM20BO75063 409 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 ALDH1L1O75891 902 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 APPP05067 770 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 STRN3Q13033 797 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 TCIRG1Q13488 830 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 ELAVL1Q15717 326 aaKnown RBP5.46□□□□□ -1.54
VPS29-202ENST00000447578 CC2D1AQ6P1N0 951 aaPredicted RBP5.46□□□□□ -1.54
VPS29-202ENST00000447578 FAM111BQ6SJ93 734 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 STRA8Q7Z7C7 330 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 ULK2Q8IYT8 1036 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 LPPQ93052 612 aa5.46□□□□□ -1.54
VPS29-202ENST00000447578 SLC7A6OSQ96CW6 309 aaPredicted RBP5.46□□□□□ -1.54
VPS29-202ENST00000447578 GEMIN8Q9NWZ8 242 aaKnown RBP5.46□□□□□ -1.54
VPS29-202ENST00000447578 OPA1O60313 960 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 RAMP2O60895 175 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 DNAJC8O75937 253 aaPredicted RBP5.45□□□□□ -1.54
VPS29-202ENST00000447578 PRLP01236 227 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 MAN2A2P49641 1150 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 FSTL1Q12841 308 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 TOB2Q14106 344 aaPredicted RBP5.45□□□□□ -1.54
VPS29-202ENST00000447578 OTOP1Q7RTM1 612 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 CERS3Q8IU89 383 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 GSPT2Q8IYD1 628 aaKnown RBP5.45□□□□□ -1.54
VPS29-202ENST00000447578 OR5AN1Q8NGI8 311 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 WDR66Q8TBY9 1149 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 NKD2Q969F2 451 aaPredicted RBP5.45□□□□□ -1.54
VPS29-202ENST00000447578 GFM2Q969S9 779 aaKnown RBP5.45□□□□□ -1.54
VPS29-202ENST00000447578 PGBD4Q96DM1 585 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 BOCQ9BWV1 1114 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 GPR87Q9BY21 358 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 NRDE2Q9H7Z3 1164 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 TRIM39Q9HCM9 518 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 GABBR1Q9UBS5 961 aa5.45□□□□□ -1.54
VPS29-202ENST00000447578 TNPO3Q9Y5L0 923 aaKnown RBP5.45□□□□□ -1.54
VPS29-202ENST00000447578 CCDC194A0A1B0GVG4 234 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 M0R2C6 588 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 NPTXRO95502 500 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 EYA4O95677 639 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 PEX11BO96011 259 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 FLT3P36888 993 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 KIF11P52732 1056 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 EPHB1P54762 984 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 SESN2P58004 480 aaPredicted RBP5.44□□□□□ -1.54
VPS29-202ENST00000447578 TTF1Q15361 905 aaPredicted RBP5.44□□□□□ -1.54
VPS29-202ENST00000447578 PCBP1Q15365 356 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS29-202ENST00000447578 DGKDQ16760 1214 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 UBE2R2Q712K3 238 aaPredicted RBP5.44□□□□□ -1.54
VPS29-202ENST00000447578 RAVER1Q8IY67 606 aaKnown RBP5.44□□□□□ -1.54
VPS29-202ENST00000447578 ELOA2Q8IYF1 753 aaPredicted RBP5.44□□□□□ -1.54
VPS29-202ENST00000447578 PCSK5Q92824 1860 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 PSMD1Q99460 953 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 SLC5A4Q9NY91 659 aa5.44□□□□□ -1.54
VPS29-202ENST00000447578 XDHP47989 1333 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms