RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SLC39A11Q8N1S5 342 aa23.52■■□□□ 1.36
VSX1-206ENST00000444511 PRPF31Q8WWY3 499 aaKnown RBP23.52■■□□□ 1.36
VSX1-206ENST00000444511 TMEM143Q96AN5 459 aa23.52■■□□□ 1.36
VSX1-206ENST00000444511 DYDC2Q96IM9 177 aa23.52■■□□□ 1.36
VSX1-206ENST00000444511 ZSWIM4Q9H7M6 989 aa23.52■■□□□ 1.36
VSX1-206ENST00000444511 IFT122Q9HBG6 1241 aa23.52■■□□□ 1.36
VSX1-206ENST00000444511 BMP2KQ9NSY1 1161 aaPredicted RBP23.52■■□□□ 1.36
VSX1-206ENST00000444511 FAM105AQ9NUU6 356 aa23.52■■□□□ 1.36
VSX1-206ENST00000444511 HIDE1A8MVS5 230 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 SRGAP2CP0DJJ0 459 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 NEK4P51957 841 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 BCAR1P56945 870 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 CYP4A11Q02928 519 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 TRIM29Q14134 588 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 XKR9Q5GH70 373 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 TNFRSF25Q93038 417 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 LPPQ93052 612 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 MUTYHQ9UIF7 546 aa23.51■■□□□ 1.35
VSX1-206ENST00000444511 NT5C1B-RDH14C9J2C7 533 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 GAS2O43903 313 aaKnown RBP23.5■■□□□ 1.35
VSX1-206ENST00000444511 ZC3H11AO75152 810 aaKnown RBP eCLIP23.5■■□□□ 1.35
VSX1-206ENST00000444511 TECP42680 631 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 SPIRE1Q08AE8 756 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 LAMTOR4Q0VGL1 99 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 CTTNQ14247 550 aaKnown RBP23.5■■□□□ 1.35
VSX1-206ENST00000444511 SMC1AQ14683 1233 aaKnown RBP23.5■■□□□ 1.35
VSX1-206ENST00000444511 EMC2Q15006 297 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 LLGL2Q6P1M3 1020 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 SRGAP1Q7Z6B7 1085 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 NSUN7Q8NE18 718 aaKnown RBP23.5■■□□□ 1.35
VSX1-206ENST00000444511 TCP11Q8WWU5 503 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 TMEM169Q96HH4 297 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 AGPAT5Q9NUQ2 364 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 INPP5FQ9Y2H2 1132 aa23.5■■□□□ 1.35
VSX1-206ENST00000444511 ZNF623O75123 536 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 CA8P35219 290 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 FOSBP53539 338 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 BMS1Q14692 1282 aaKnown RBP23.49■■□□□ 1.35
VSX1-206ENST00000444511 CALCRLQ16602 461 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 HERC4Q5GLZ8 1057 aaPredicted RBP23.49■■□□□ 1.35
VSX1-206ENST00000444511 NOMO2Q5JPE7 1267 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 TMEM184AQ6ZMB5 413 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 TPH2Q8IWU9 490 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 PGBD4Q96DM1 585 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 PHF7Q9BWX1 381 aaPredicted RBP23.49■■□□□ 1.35
VSX1-206ENST00000444511 PCDHA12Q9UN75 941 aa23.49■■□□□ 1.35
VSX1-206ENST00000444511 CARNS1A5YM72 827 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 BTBD18B2RXH4 712 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 ASAP2O43150 1006 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 JAK2O60674 1132 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 RNASELQ05823 741 aaKnown RBP23.48■■□□□ 1.35
VSX1-206ENST00000444511 KCNC3Q14003 757 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 ANKRD54Q6NXT1 300 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 DIS3L2Q8IYB7 885 aaKnown RBP23.48■■□□□ 1.35
VSX1-206ENST00000444511 MRPL43Q8N983 215 aaKnown RBP23.48■■□□□ 1.35
VSX1-206ENST00000444511 EIF2AK1Q9BQI3 630 aaKnown RBP23.48■■□□□ 1.35
VSX1-206ENST00000444511 TBC1D13Q9NVG8 400 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 PCDHB2Q9Y5E7 798 aa23.48■■□□□ 1.35
VSX1-206ENST00000444511 MEIS3P2A8K0S8 358 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 LOC730098B7Z3J9 87 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 ZBTB39O15060 712 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 SLITRK3O94933 977 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 FERMT3Q86UX7 667 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 RNF149Q8NC42 400 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 SUSD6Q92537 303 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 RPGRIP1Q96KN7 1286 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 MTRQ99707 1265 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 MINDY3Q9H8M7 445 aa23.47■■□□□ 1.35
VSX1-206ENST00000444511 C2orf71A6NGG8 1288 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 NEMFO60524 1076 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 OFD1O75665 1012 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 URGCPQ8TCY9 931 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 CASP10Q92851 521 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 CCDC43Q96MW1 224 aaKnown RBP23.46■■□□□ 1.35
VSX1-206ENST00000444511 APOL5Q9BWW9 433 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 GBP3Q9H0R5 595 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 NRDE2Q9H7Z3 1164 aa23.46■■□□□ 1.35
VSX1-206ENST00000444511 TTC12Q9H892 705 aaPredicted RBP23.46■■□□□ 1.35
VSX1-206ENST00000444511 ERLIN2O94905 339 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 CXCL14O95715 111 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 HOXB8P17481 243 aaPredicted RBP23.45■■□□□ 1.34
VSX1-206ENST00000444511 TXKP42681 527 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 CBX2Q14781 532 aaPredicted RBP23.45■■□□□ 1.34
VSX1-206ENST00000444511 SYCE2Q6PIF2 218 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 VPS52Q8N1B4 723 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 TMEM87AQ8NBN3 555 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 S1PR5Q9H228 398 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 HCFC2Q9Y5Z7 792 aa23.45■■□□□ 1.34
VSX1-206ENST00000444511 LYPLA2O95372 231 aa23.44■■□□□ 1.34
VSX1-206ENST00000444511 GALTP07902 379 aa23.44■■□□□ 1.34
VSX1-206ENST00000444511 HOXA11P31270 313 aaPredicted RBP23.44■■□□□ 1.34
VSX1-206ENST00000444511 MXD4Q14582 209 aaPredicted RBP23.44■■□□□ 1.34
VSX1-206ENST00000444511 TPRNQ4KMQ1 711 aa23.44■■□□□ 1.34
VSX1-206ENST00000444511 AGMOQ6ZNB7 445 aa23.44■■□□□ 1.34
VSX1-206ENST00000444511 MRPL10Q7Z7H8 261 aaKnown RBP23.44■■□□□ 1.34
VSX1-206ENST00000444511 TMEM173Q86WV6 379 aaPredicted RBP23.44■■□□□ 1.34
VSX1-206ENST00000444511 EDAQ92838 391 aa23.44■■□□□ 1.34
VSX1-206ENST00000444511 IGSF21Q96ID5 467 aa23.44■■□□□ 1.34
VSX1-206ENST00000444511 HSD17B14Q9BPX1 270 aa23.44■■□□□ 1.34
VSX1-206ENST00000444511 RSAD1Q9HA92 442 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms