RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TBX20Q9UMR3 447 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 DNAH12Q6ZR08 3092 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 SIP14410 1827 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 ZMYM2Q9UBW7 1377 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 A0A0U1RQG5 324 aaPredicted RBP23.19■■□□□ 1.3
VPS13B-204ENST00000441350 BICDL2A1A5D9 508 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 TRIM49BA6NDI0 452 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 TFRCP02786 760 aaKnown RBP23.19■■□□□ 1.3
VPS13B-204ENST00000441350 GJA8P48165 433 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 ANKRD40Q6AI12 368 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 SERINC5Q86VE9 423 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 NFKBIZQ9BYH8 718 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 MCOLN1Q9GZU1 580 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 TMEM134Q9H6X4 195 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 SMTNL1A8MU46 457 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 EFNA5P52803 228 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 PTENP60484 403 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 CDC42EP1Q00587 391 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 LRRC63Q05C16 580 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 SPATA1Q5VX52 437 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 IFNLR1Q8IU57 520 aaPredicted RBP23.19■■□□□ 1.3
VPS13B-204ENST00000441350 NME8Q8N427 588 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 DNAJB3Q8WWF6 145 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 NLRP4Q96MN2 994 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 ACCSQ96QU6 501 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 DUSP9Q99956 384 aaKnown RBP23.19■■□□□ 1.3
VPS13B-204ENST00000441350 SEZ6LQ9BYH1 1024 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 IFT122Q9HBG6 1241 aa23.19■■□□□ 1.3
VPS13B-204ENST00000441350 GOLGA6L3A6NEY3 463 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 BECN2A8MW95 431 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 PDXKO00764 312 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 TGFB1I1O43294 461 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 GPC3P51654 580 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 ZNF410Q86VK4 478 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 MAP4K3Q8IVH8 894 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 CCDC113Q9H0I3 377 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 C2orf40Q9H1Z8 148 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 ADAMTS10Q9H324 1103 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 TMEM206Q9H813 350 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 TRAF3IP3Q9Y228 551 aa23.18■■□□□ 1.3
VPS13B-204ENST00000441350 ARVCFO00192 962 aa23.17■■□□□ 1.3
VPS13B-204ENST00000441350 CDK7P50613 346 aa23.17■■□□□ 1.3
VPS13B-204ENST00000441350 NLRP11P59045 1033 aaKnown RBP23.17■■□□□ 1.3
VPS13B-204ENST00000441350 PTGISQ16647 500 aa23.17■■□□□ 1.3
VPS13B-204ENST00000441350 RPAINQ86UA6 219 aa23.17■■□□□ 1.3
VPS13B-204ENST00000441350 ZNF668Q96K58 619 aaPredicted RBP23.17■■□□□ 1.3
VPS13B-204ENST00000441350 HSD3B7Q9H2F3 369 aa23.17■■□□□ 1.3
VPS13B-204ENST00000441350 IKZF4Q9H2S9 585 aa23.17■■□□□ 1.3
VPS13B-204ENST00000441350 TYW1Q9NV66 732 aaKnown RBP23.17■■□□□ 1.3
VPS13B-204ENST00000441350 NFE2L3Q9Y4A8 694 aa23.17■■□□□ 1.3
VPS13B-204ENST00000441350 PHLPP2Q6ZVD8 1323 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 A0A087WZ62 844 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 K7ERI5 159 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 GPR32O75388 356 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 PHKA2P46019 1235 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 PPP4R3CPQ6ZMV5 832 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 ZBTB8OSQ8IWT0 167 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 ZNF710Q8N1W2 664 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 FDXACB1Q9BRP7 624 aaPredicted RBP23.16■■□□□ 1.3
VPS13B-204ENST00000441350 GBP3Q9H0R5 595 aa23.16■■□□□ 1.3
VPS13B-204ENST00000441350 RPLP2P05387 115 aaKnown RBP23.15■■□□□ 1.3
VPS13B-204ENST00000441350 EDRF1Q3B7T1 1238 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 SYCP3Q8IZU3 236 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 ANKLE1Q8NAG6 615 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 WNT8BQ93098 351 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 PPP1R16BQ96T49 567 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 TSG101Q99816 390 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 TRMT13Q9NUP7 481 aaKnown RBP23.15■■□□□ 1.3
VPS13B-204ENST00000441350 FANCLQ9NW38 375 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 EXOC7Q9UPT5 735 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 GOLGA6L19H0YKK7 550 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 CAPN2P17655 700 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 MBTD1Q05BQ5 628 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 TMEM62Q0P6H9 643 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 STRN3Q13033 797 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 NLRP7Q8WX94 980 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 MINDY3Q9H8M7 445 aa23.15■■□□□ 1.3
VPS13B-204ENST00000441350 COL6A1P12109 1028 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 SNRPFP62306 86 aaKnown RBP23.14■■□□□ 1.29
VPS13B-204ENST00000441350 PTK7Q13308 1070 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 NFIL3Q16649 462 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 KIZQ2M2Z5 673 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 UVSSAQ2YD98 709 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 HS2ST1Q7LGA3 356 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 ZC3H3Q8IXZ2 948 aaKnown RBP23.14■■□□□ 1.29
VPS13B-204ENST00000441350 CSGALNACT2Q8N6G5 542 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 GOLGA5Q8TBA6 731 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 SENP6Q9GZR1 1112 aaPredicted RBP23.14■■□□□ 1.29
VPS13B-204ENST00000441350 FZD8Q9H461 694 aa23.14■■□□□ 1.29
VPS13B-204ENST00000441350 CALUO43852 315 aaPredicted RBP23.13■■□□□ 1.29
VPS13B-204ENST00000441350 B4GALT4O60513 344 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 PIGRP01833 764 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 MAPK6Q16659 721 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 LRRC55Q6ZSA7 311 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 SRGAP1Q7Z6B7 1085 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 RSPH3Q86UC2 560 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 TMEM106CQ9BVX2 250 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 TRPV6Q9H1D0 765 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 GRPEL1Q9HAV7 217 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 CDHR5Q9HBB8 845 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms