RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 C4orf19Q8IY42 314 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 PGBD4Q96DM1 585 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 IFT122Q9HBG6 1241 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 TPCN1Q9ULQ1 816 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 COL4A3BPQ9Y5P4 624 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 C2orf71A6NGG8 1288 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 NT5C1B-RDH14C9J2C7 533 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 BAG4O95429 457 aaKnown RBP23.21■■□□□ 1.31
CPNE1-219ENST00000440240 CXCL14O95715 111 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 POLGP54098 1239 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-219ENST00000440240 ANAPC15P60006 121 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 ZXDAP98168 799 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 NOMO2Q5JPE7 1267 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 SLFN12Q8IYM2 578 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 PRPF31Q8WWY3 499 aaKnown RBP23.21■■□□□ 1.31
CPNE1-219ENST00000440240 PSPC1Q8WXF1 523 aaKnown RBP23.21■■□□□ 1.31
CPNE1-219ENST00000440240 HAS1Q92839 578 aa23.21■■□□□ 1.31
CPNE1-219ENST00000440240 DHX33Q9H6R0 707 aaKnown RBP23.21■■□□□ 1.31
CPNE1-219ENST00000440240 TECTAO75443 2155 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 ASAP2O43150 1006 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 GAS2O43903 313 aaKnown RBP23.2■■□□□ 1.3
CPNE1-219ENST00000440240 ZC3H11AO75152 810 aaKnown RBP eCLIP23.2■■□□□ 1.3
CPNE1-219ENST00000440240 RNASELQ05823 741 aaKnown RBP23.2■■□□□ 1.3
CPNE1-219ENST00000440240 GIT2Q14161 759 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 CES5AQ6NT32 575 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 SRGAP1Q7Z6B7 1085 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 TMEM87AQ8NBN3 555 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 OXER1Q8TDS5 423 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 TCP11Q8WWU5 503 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 LPPQ93052 612 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 FBXL18Q96ME1 805 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 ORC3Q9UBD5 711 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-219ENST00000440240 HCFC2Q9Y5Z7 792 aa23.2■■□□□ 1.3
CPNE1-219ENST00000440240 TMEM221A6NGB7 291 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 M0R296 226 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 OFD1O75665 1012 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 NEFLP07196 543 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 YWHABP31946 246 aaKnown RBP23.19■■□□□ 1.3
CPNE1-219ENST00000440240 ITIH3Q06033 890 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 LONRF3Q496Y0 759 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 VPS52Q8N1B4 723 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 ZNF579Q8NAF0 562 aaKnown RBP23.19■■□□□ 1.3
CPNE1-219ENST00000440240 PBXIP1Q96AQ6 731 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 LXNQ9BS40 222 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 ZSWIM4Q9H7M6 989 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 BRMS1Q9HCU9 246 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 GJB4Q9NTQ9 266 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 AGPAT5Q9NUQ2 364 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 TBC1D13Q9NVG8 400 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 WRAP73Q9P2S5 460 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-219ENST00000440240 PCDHB2Q9Y5E7 798 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 IRAK3Q9Y616 596 aa23.19■■□□□ 1.3
CPNE1-219ENST00000440240 CLASP2O75122 1294 aaKnown RBP23.18■■□□□ 1.3
CPNE1-219ENST00000440240 GALTP07902 379 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 SRGAP2CP0DJJ0 459 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 CA8P35219 290 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 DDX53Q86TM3 631 aaKnown RBP23.18■■□□□ 1.3
CPNE1-219ENST00000440240 TMEM143Q96AN5 459 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 IGSF21Q96ID5 467 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 NECTIN4Q96NY8 510 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 APOL5Q9BWW9 433 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 ADAM7Q9H2U9 754 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 NRDE2Q9H7Z3 1164 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 STK39Q9UEW8 545 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 INPP5FQ9Y2H2 1132 aa23.18■■□□□ 1.3
CPNE1-219ENST00000440240 CTDNEP1O95476 244 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 LAMTOR4Q0VGL1 99 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 NCAPH2Q6IBW4 605 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 MRPL10Q7Z7H8 261 aaKnown RBP23.17■■□□□ 1.3
CPNE1-219ENST00000440240 POTEDQ86YR6 584 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 URGCPQ8TCY9 931 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 ZBP1Q9H171 429 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 RGL1Q9NZL6 768 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 KANSL3Q9P2N6 904 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 NR2E1Q9Y466 385 aa23.17■■□□□ 1.3
CPNE1-219ENST00000440240 ZNF318Q5VUA4 2279 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 CTSAP10619 480 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 KRT2P35908 639 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 AK2P54819 239 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 SIGLEC14Q08ET2 396 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 XKR9Q5GH70 373 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 DYDC2Q96IM9 177 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 PCDHA12Q9UN75 941 aa23.16■■□□□ 1.3
CPNE1-219ENST00000440240 CNTNAP2Q9UHC6 1331 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-219ENST00000440240 MEIS3P2A8K0S8 358 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 SLITRK3O94933 977 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 ALDH2P05091 517 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 HOXA11P31270 313 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-219ENST00000440240 SPIRE1Q08AE8 756 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 MXD4Q14582 209 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-219ENST00000440240 EMC2Q15006 297 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 PCBP1Q15365 356 aaKnown RBP eCLIP23.15■■□□□ 1.32e-19■□□□□ 8.2
CPNE1-219ENST00000440240 EARS2Q5JPH6 523 aaKnown RBP23.15■■□□□ 1.3
CPNE1-219ENST00000440240 AGMOQ6ZNB7 445 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 FERMT3Q86UX7 667 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 TMEM173Q86WV6 379 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-219ENST00000440240 TPH2Q8IWU9 490 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 SUGP1Q8IWZ8 645 aaKnown RBP23.15■■□□□ 1.3
CPNE1-219ENST00000440240 RNF149Q8NC42 400 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms