RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SEPT11Q9NVA2 429 aaKnown RBP11.33□□□□□ -0.6
CPNE1-218ENST00000439806 GABBR1Q9UBS5 961 aa11.33□□□□□ -0.6
CPNE1-218ENST00000439806 PCDHA10Q9Y5I2 948 aa11.33□□□□□ -0.6
CPNE1-218ENST00000439806 POLR2AP24928 1970 aaKnown RBP11.33□□□□□ -0.6
CPNE1-218ENST00000439806 NCANO14594 1321 aa11.33□□□□□ -0.6
CPNE1-218ENST00000439806 NFASCO94856 1347 aa11.33□□□□□ -0.6
CPNE1-218ENST00000439806 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-218ENST00000439806 TMCO5BA8MYB1 307 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-218ENST00000439806 STAM2O75886 525 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 MXI1P50539 228 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 GALCP54803 685 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 NPEPPSP55786 919 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 KIF22Q14807 665 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 GNPTABQ3T906 1256 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 EPC2Q52LR7 807 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 NOL9Q5SY16 702 aaKnown RBP11.32□□□□□ -0.6
CPNE1-218ENST00000439806 CATSPERGQ6ZRH7 1159 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 PEX26Q7Z412 305 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 TPCN2Q8NHX9 752 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 KIFAP3Q92845 792 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 SH2D3AQ9BRG2 576 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 TEX13BQ9BXU2 312 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 MAF1Q9H063 256 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 MED4Q9NPJ6 270 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 RBM12Q9NTZ6 932 aaKnown RBP11.32□□□□□ -0.6
CPNE1-218ENST00000439806 GGA3Q9NZ52 723 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 HPCAL4Q9UM19 191 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-218ENST00000439806 PTPRFP10586 1907 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 EP400Q96L91 3159 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
CPNE1-218ENST00000439806 GOLGA8IPA6NC78 632 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 GOLGA8JA6NMD2 632 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 TISP43B9A030 160 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 KCNK3O14649 394 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 ATP2A1O14983 1001 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 CEP104O60308 925 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 TMEM253P0C7T8 217 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 GCLMP48507 274 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 EPHB4P54760 987 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 DLG4P78352 724 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 TMEM132BQ14DG7 1078 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 SUPT20HL1Q3ZLR7 823 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 MIS18BP1Q6P0N0 1132 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 SND1Q7KZF4 910 aaKnown RBP eCLIP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 GLYCTKQ8IVS8 523 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 SLC30A5Q8TAD4 765 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 TRPM4Q8TD43 1214 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 TMEM174Q8WUU8 243 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 CTNNBL1Q8WYA6 563 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 RFFLQ8WZ73 363 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 IFT74Q96LB3 600 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 INPP4AQ96PE3 977 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 ZMYND15Q9H091 742 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 C17orf75Q9HAS0 396 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 ATP6V0A4Q9HBG4 840 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 JPH1Q9HDC5 661 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 ZCCHC17Q9NP64 241 aaKnown RBP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 STIM2Q9P246 746 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 VPS18Q9P253 973 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 SLC9A2Q9UBY0 812 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 AMFRQ9UKV5 643 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-218ENST00000439806 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 ADAMTS5Q9UNA0 930 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
CPNE1-218ENST00000439806 SIP14410 1827 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 DENND3A2RUS2 1198 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 H0YCG3 227 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 LRRN2O75325 713 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 ADRB2P07550 413 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 KCNA2P16389 499 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 NPTX2P47972 431 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 SP4Q02446 784 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 PPP3CAQ08209 521 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 PAK2Q13177 524 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 PHLDB3Q6NSJ2 640 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 SWSAP1Q6NVH7 229 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 ANO5Q75V66 913 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 DAAM2Q86T65 1068 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 USP37Q86T82 979 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 MAP4K3Q8IVH8 894 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 MCPH1Q8NEM0 835 aa11.3□□□□□ -0.6
CPNE1-218ENST00000439806 LMO3Q8TAP4 145 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms