RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MTMR10Q9NXD2 777 aa6.43□□□□□ -1.38
HMGB3P24-201ENST00000433260 MTUS1Q9ULD2 1270 aa6.43□□□□□ -1.38
HMGB3P24-201ENST00000433260 MTMR6Q9Y217 621 aa6.43□□□□□ -1.38
HMGB3P24-201ENST00000433260 PCDHA11Q9Y5I1 949 aa6.43□□□□□ -1.38
HMGB3P24-201ENST00000433260 MICAL3Q7RTP6 2002 aa6.43□□□□□ -1.38
HMGB3P24-201ENST00000433260 IGKV6-21A0A0C4DH24 114 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 DENND3A2RUS2 1198 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 LCHNA4D1U4 455 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 LAD1O00515 517 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 GPR182O15218 404 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 MGEA5O60502 916 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 USO1O60763 962 aaKnown RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 EFCAB14O75071 495 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 ARHGEF15O94989 841 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 GJB5O95377 273 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 RPLP2P05387 115 aaKnown RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 SSBP05455 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 ZSCAN20P17040 1043 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 IGFBP4P22692 258 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 EIF4BP23588 611 aaKnown RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 RPA1P27694 616 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 MARCKSP29966 332 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 RFC5P40937 340 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 PRPHP41219 470 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 RARRES1P49788 294 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 ATP2C1P98194 919 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 GUCA2AQ02747 115 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 GRIN1Q05586 938 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 RESTQ13127 1097 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 ORC2Q13416 577 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 DHX8Q14562 1220 aaKnown RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 EMC2Q15006 297 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 LONRF3Q496Y0 759 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 SPECC1Q5M775 1068 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 FAM102BQ5T8I3 360 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 BRAPQ7Z569 592 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 SPRED2Q7Z698 418 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 FAM228AQ86W67 206 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 IGSF22Q8N9C0 903 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 USP38Q8NB14 1042 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 RNF169Q8NCN4 708 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 NEK9Q8TD19 979 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 TCP11Q8WWU5 503 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 MYLIPQ8WY64 445 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 GUCD1Q96NT3 240 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 CDX2Q99626 313 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 ADAM2Q99965 735 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 JPH2Q9BR39 696 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 PANK2Q9BZ23 570 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 GCOM2Q9BZD3 368 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 RAB34Q9BZG1 259 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 BHMT2Q9H2M3 363 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 PRDM12Q9H4Q4 367 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 DHX33Q9H6R0 707 aaKnown RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 ERVK-5Q9HDB9 667 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 TUFT1Q9NNX1 390 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 GPRC5CQ9NQ84 441 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 XPNPEP1Q9NQW7 623 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 DDX19AQ9NUU7 478 aaKnown RBP6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 HCSTQ9UBK5 93 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 LRFN2Q9ULH4 789 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 SLC27A5Q9Y2P5 690 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 PCDHB7Q9Y5E2 793 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 SQORQ9Y6N5 450 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 KDM3AQ9Y4C1 1321 aa6.42□□□□□ -1.38
HMGB3P24-201ENST00000433260 MYH15Q9Y2K3 1946 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 ARHGEF35A5YM69 484 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 DGAT1O75907 488 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 LYPLA2O95372 231 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 DARSP14868 501 aaKnown RBP6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 LIG1P18858 919 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 UBA7P41226 1012 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 GATMP50440 423 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 CDC42EP1Q00587 391 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 TAP1Q03518 808 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 RAD51AP2Q09MP3 1159 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 LAMTOR4Q0VGL1 99 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 PKP1Q13835 747 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 CCDC85BQ15834 202 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 ODR4Q5SWX8 454 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 HAUS3Q68CZ6 603 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 EXOC8Q8IYI6 725 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 RASSF8Q8NHQ8 419 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 PSPC1Q8WXF1 523 aaKnown RBP6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 LINC01599Q8WXQ3 324 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 ARNTL2Q8WYA1 636 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 HLA-CQ95604 372 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 CDK5RAP3Q96JB5 506 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 CLIC6Q96NY7 704 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 PNMA5Q96PV4 448 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 USP28Q96RU2 1077 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 YME1L1Q96TA2 773 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 RAD9AQ99638 391 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 MMTAG2Q9BU76 263 aaKnown RBP6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 FTHL17Q9BXU8 183 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 POLR3FQ9H1D9 316 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 ZSCAN16Q9H4T2 348 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms