RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 DIS3L2Q8IYB7 885 aaKnown RBP19.12■□□□□ 0.65
CPSF4-203ENST00000430038 ABI1Q8IZP0 508 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 MTMR9Q96QG7 549 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 EIF2AK1Q9BQI3 630 aaKnown RBP19.12■□□□□ 0.65
CPSF4-203ENST00000430038 TMEM60Q9H2L4 133 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 NRDE2Q9H7Z3 1164 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 FAM105AQ9NUU6 356 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 DACT1Q9NYF0 836 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 SPG21Q9NZD8 308 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 MUTYHQ9UIF7 546 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 FAM50BQ9Y247 325 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 DCXO43602 365 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 SFPQP23246 707 aaKnown RBP eCLIP19.11■□□□□ 0.65
CPSF4-203ENST00000430038 POLGP54098 1239 aaPredicted RBP19.11■□□□□ 0.65
CPSF4-203ENST00000430038 GUCY1B3Q02153 619 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 CSPP1Q1MSJ5 1256 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 XKR9Q5GH70 373 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 TWF2Q6IBS0 349 aaKnown RBP19.11■□□□□ 0.65
CPSF4-203ENST00000430038 LLGL2Q6P1M3 1020 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 SYCE2Q6PIF2 218 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 TMEM184AQ6ZMB5 413 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 ZNF280BQ86YH2 543 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 RNF135Q8IUD6 432 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 AUTS2Q8WXX7 1259 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 SUSD6Q92537 303 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 WASF1Q92558 559 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 PPP2R3CQ969Q6 453 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 KIF2CQ99661 725 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 APOL5Q9BWW9 433 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 VN1R3Q9BXE9 311 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 AGPAT5Q9NUQ2 364 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 TBC1D13Q9NVG8 400 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 DNAJB4Q9UDY4 337 aa19.11■□□□□ 0.65
CPSF4-203ENST00000430038 C2orf71A6NGG8 1288 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 LOC730098B7Z3J9 87 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 ZNF623O75123 536 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 EMC2Q15006 297 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 FERMT3Q86UX7 667 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 SLFN12Q8IYM2 578 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 SLC7A3Q8WY07 619 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 ZSWIM4Q9H7M6 989 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 TTC12Q9H892 705 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-203ENST00000430038 ENTPD7Q9NQZ7 604 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 PCDHA12Q9UN75 941 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 PCDHB2Q9Y5E7 798 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 ZNF318Q5VUA4 2279 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 MUC6Q6W4X9 2439 aa19.1■□□□□ 0.65
CPSF4-203ENST00000430038 MARCH6O60337 910 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 DDHD2O94830 711 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 GALTP07902 379 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 ALADP13716 330 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 RFC5P40937 340 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 TXKP42681 527 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 CALCRLQ16602 461 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 PDE12Q6L8Q7 609 aaKnown RBP19.09■□□□□ 0.65
CPSF4-203ENST00000430038 KANK3Q6NY19 840 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 TMC7Q7Z402 723 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 MRPL10Q7Z7H8 261 aaKnown RBP19.09■□□□□ 0.65
CPSF4-203ENST00000430038 MRPL43Q8N983 215 aaKnown RBP19.09■□□□□ 0.65
CPSF4-203ENST00000430038 ASAP3Q8TDY4 903 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 PSPC1Q8WXF1 523 aaKnown RBP19.09■□□□□ 0.65
CPSF4-203ENST00000430038 NAP1L4Q99733 375 aaKnown RBP19.09■□□□□ 0.65
CPSF4-203ENST00000430038 INO80BQ9C086 356 aaPredicted RBP19.09■□□□□ 0.65
CPSF4-203ENST00000430038 PUF60Q9UHX1 559 aaKnown RBP19.09■□□□□ 0.65
CPSF4-203ENST00000430038 INPP5FQ9Y2H2 1132 aa19.09■□□□□ 0.65
CPSF4-203ENST00000430038 POTEMA6NI47 508 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 PRR33A8MZF0 331 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 ZC3H11AO75152 810 aaKnown RBP eCLIP19.08■□□□□ 0.64
CPSF4-203ENST00000430038 BAG4O95429 457 aaKnown RBP19.08■□□□□ 0.64
CPSF4-203ENST00000430038 SPATA31C1P0DKV0 1188 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 TECP42680 631 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 NOMO2Q5JPE7 1267 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 ANKRD54Q6NXT1 300 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 SRGAP1Q7Z6B7 1085 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 CCDC83Q8IWF9 413 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 RNF149Q8NC42 400 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 SMG8Q8ND04 991 aaKnown RBP19.08■□□□□ 0.64
CPSF4-203ENST00000430038 PIGOQ8TEQ8 1089 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 CDCA3Q99618 268 aaPredicted RBP19.08■□□□□ 0.64
CPSF4-203ENST00000430038 JPH2Q9BR39 696 aaPredicted RBP19.08■□□□□ 0.64
CPSF4-203ENST00000430038 RNF39Q9H2S5 420 aa19.08■□□□□ 0.64
CPSF4-203ENST00000430038 NGRNQ9NPE2 291 aaKnown RBP19.08■□□□□ 0.64
CPSF4-203ENST00000430038 DKC1O60832 514 aaKnown RBP eCLIP19.07■□□□□ 0.64
CPSF4-203ENST00000430038 CLASP2O75122 1294 aaKnown RBP19.07■□□□□ 0.64
CPSF4-203ENST00000430038 LYPLA2O95372 231 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 PPM1AP35813 382 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 PLA2G5P39877 138 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 SLC11A1P49279 550 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 KRT17Q04695 432 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 CBX2Q14781 532 aaPredicted RBP19.07■□□□□ 0.64
CPSF4-203ENST00000430038 AMHR2Q16671 573 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 HERC4Q5GLZ8 1057 aaPredicted RBP19.07■□□□□ 0.64
CPSF4-203ENST00000430038 OTUD6AQ7L8S5 288 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 IGSF21Q96ID5 467 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 CPB2Q96IY4 423 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 EIF2AQ9BY44 585 aaKnown RBP19.07■□□□□ 0.64
CPSF4-203ENST00000430038 MIOSQ9NXC5 875 aa19.07■□□□□ 0.64
CPSF4-203ENST00000430038 TDRD15B5MCY1 1934 aaKnown RBP19.06■□□□□ 0.64
CPSF4-203ENST00000430038 NEMFO60524 1076 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 CXCL14O95715 111 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms