RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PITPNM3Q9BZ71 974 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 PREBQ9HCU5 417 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 CYP39A1Q9NYL5 469 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 ARMCX3Q9UH62 379 aaPredicted RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 CCDC188H7C350 402 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 KCNA3P22001 575 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 KCNQ4P56696 695 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 AMPD3Q01432 767 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 C6orf118Q5T5N4 469 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 OR52E8Q6IFG1 317 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 TTC27Q6P3X3 843 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 DSTYKQ6XUX3 929 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 PALB2Q86YC2 1186 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 KRT35Q92764 455 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 DYNLL2Q96FJ2 89 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 FAM118BQ9BPY3 351 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 TAS2R14Q9NYV8 317 aa12.15□□□□□ -0.47
SEC61A1-202ENST00000424880 KCNQ2O43526 872 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 UCHL3P15374 230 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 FOXN2P32314 431 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 KYNUQ16719 465 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 TBCKQ8TEA7 893 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 NRG4Q8WWG1 115 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 DYDC2Q96IM9 177 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 MXD3Q9BW11 206 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 TRIM7Q9C029 511 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 UBA5Q9GZZ9 404 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 SLITRK6Q9H5Y7 841 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 GRHL1Q9NZI5 618 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 AMFRQ9UKV5 643 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 BAZ2AQ9UIF9 1905 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 AGTP01019 485 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 GSTT1P30711 240 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 KIAA0825Q8IV33 1275 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 MYOCDQ8IZQ8 938 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 PNMA5Q96PV4 448 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 TSG101Q99816 390 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 NIP7Q9Y221 180 aaKnown RBP eCLIP12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 CHKBQ9Y259 395 aa12.14□□□□□ -0.47
SEC61A1-202ENST00000424880 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 KRT36O76013 467 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 WFS1O76024 890 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 TDP2O95551 362 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 NUDT17P0C025 328 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 H2AFZP0C0S5 128 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 CETPP11597 493 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 NAPAP54920 295 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 CTTNQ14247 550 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 H2AFVQ71UI9 128 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 CCDC105Q8IYK2 499 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SCG3Q8WXD2 468 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 ARHGEF26Q96DR7 871 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 NUMBLQ9Y6R0 609 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 DOT1LQ8TEK3 1739 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 DDX3XO00571 662 aaKnown RBP eCLIP12.13□□□□□ -0.471e-14■□□□□ 11.3
SEC61A1-202ENST00000424880 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SLC37A4O43826 429 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SLC5A1P13866 664 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 CALML3P27482 149 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 RCN1Q15293 331 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 NLRP10Q86W26 655 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SLC44A5Q8NCS7 719 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SNX29Q8TEQ0 813 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 MAIP1Q8WWC4 291 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 WDR91A4D1P6 747 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 GNAT2P19087 354 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 CHKAP35790 457 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 GNAQP50148 359 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 LMNB2Q03252 620 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 DEUP1Q05D60 604 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 INTS5Q6P9B9 1019 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 TAOK1Q7L7X3 1001 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 GUF1Q8N442 669 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 NDNQ99608 321 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 NT5C3AQ9H0P0 336 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SUDS3Q9H7L9 328 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 SCOCQ9UIL1 159 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 BLOC1S6Q9UL45 172 aa12.13□□□□□ -0.47
SEC61A1-202ENST00000424880 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 E9PMD0 336 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 GJB6O95452 261 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 CASP5P51878 434 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 NEK3P51956 506 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 PTENP60484 403 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 TFAP4Q01664 338 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 MCL1Q07820 350 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 MAPK7Q13164 816 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms