RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 HNRNPLP14866 589 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 SOX5P35711 763 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 STAT3P40763 770 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 SAFB2Q14151 953 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 DDB1Q16531 1140 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 PALM2Q8IXS6 379 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 THEMISQ8N1K5 641 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 FERMT2Q96AC1 680 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 TTC1Q99614 292 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 AURKAIP1Q9NWT8 199 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 TMPRSS11EQ9UL52 423 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 ST20-MTHFSA0A0A6YYL1 179 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 MTSS1O43312 755 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 NRP2O60462 931 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 GAAP10253 952 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 XPAP23025 273 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 HIBADHP31937 336 aaKnown RBP5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 ACAP1Q15027 740 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 SPDYAQ5MJ70 313 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 ZBTB41Q5SVQ8 909 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 FAM111BQ6SJ93 734 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 SGMS1Q86VZ5 419 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 CXorf67Q86X51 503 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 CMTM4Q8IZR5 234 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 ANKRD35Q8N283 1001 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 D2HGDHQ8N465 521 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 CHAC2Q8WUX2 184 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 GAB3Q8WWW8 586 aa5.09□□□□□ -1.59
HMGB3P23-201ENST00000414981 UBE2QL1A1L167 161 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 NEMP1O14524 444 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 CYP27B1O15528 508 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 BRINP1O60477 761 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 TOX4O94842 621 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 SEC24DO94855 1032 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 MANFP55145 182 aaKnown RBP5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 SESN3P58005 492 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 CD69Q07108 199 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 FAPQ12884 760 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 SPTY2D1Q68D10 685 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 KRT40Q6A162 431 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 GAREM2Q75VX8 874 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 TAS1R1Q7RTX1 841 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 KRT26Q7Z3Y9 468 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 UNC5BQ8IZJ1 945 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 ZNF808Q8N4W9 903 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 TMEM176AQ96HP8 235 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 UIMC1Q96RL1 719 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 TCF25Q9BQ70 676 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 ANO3Q9BYT9 981 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 ZNF703Q9H7S9 590 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 TLR9Q9NR96 1032 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 USP18Q9UMW8 372 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 SH3BP1Q9Y3L3 701 aa5.08□□□□□ -1.6
HMGB3P23-201ENST00000414981 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 LCHNA4D1U4 455 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 KDM1AO60341 852 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 AMHP03971 560 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 VIL1P09327 827 aaKnown RBP5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 CPEP16870 476 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 ACRV1P26436 265 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 ZXDAP98168 799 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 FOXE3Q13461 319 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 USP39Q53GS9 565 aaKnown RBP5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 EGFLAMQ63HQ2 1017 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 CRIP3Q6Q6R5 217 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 STRA8Q7Z7C7 330 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 LYSMD2Q8IV50 215 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 SLC41A1Q8IVJ1 513 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 GSPT2Q8IYD1 628 aaKnown RBP5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 EXTL1Q92935 676 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 MIEF2Q96C03 454 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 ZNF747Q9BV97 191 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 IL23AQ9NPF7 189 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 PRSS50Q9UI38 385 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 RCAN3Q9UKA8 241 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 APOBEC2Q9Y235 224 aaKnown RBP5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 GIT1Q9Y2X7 761 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 PRKAB1Q9Y478 270 aa5.07□□□□□ -1.6
HMGB3P23-201ENST00000414981 LY86O95711 162 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 ID4P47928 161 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 NPEPPSP55786 919 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 NRG3P56975 720 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 STRN3Q13033 797 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 NRN1LQ496H8 165 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 MIIPQ5JXC2 388 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 MFSD5Q6N075 450 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 RNF207Q6ZRF8 634 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 C1orf210Q8IVY1 113 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 AFAP1L2Q8N4X5 818 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 UBR7Q8N806 425 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 OR14C36Q8NHC7 312 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 ZNF503Q96F45 646 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 MS4A5Q9H3V2 200 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 PPP2R3BQ9Y5P8 575 aa5.06□□□□□ -1.6
HMGB3P23-201ENST00000414981 A0A1W2PR48 441 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 CAPN14A8MX76 684 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 NRP1O14786 923 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 MFAP3LO75121 409 aa5.05□□□□□ -1.6
HMGB3P23-201ENST00000414981 ALDH1A2O94788 518 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms